Mock Version: 4.1 Mock Version: 4.1 Mock Version: 4.1 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target aarch64 --nodeps /builddir/build/SPECS/nco.spec'], chrootPath='/var/lib/mock/dist-oc9-epol-build-109192-67350/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=86400uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target aarch64 --nodeps /builddir/build/SPECS/nco.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: aarch64 Building for target aarch64 Wrote: /builddir/build/SRPMS/nco-5.1.8-1.oc9.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target aarch64 --nodeps /builddir/build/SPECS/nco.spec'], chrootPath='/var/lib/mock/dist-oc9-epol-build-109192-67350/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=86400uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target aarch64 --nodeps /builddir/build/SPECS/nco.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: aarch64 Building for target aarch64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.ysMe4Y + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf nco-5.1.8 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/nco-5.1.8.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd nco-5.1.8 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . Patch #0 (nco-install_C_headers.patch): + echo 'Patch #0 (nco-install_C_headers.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .install_C_headers --fuzz=0 patching file src/nco/Makefile.in Hunk #1 succeeded at 782 (offset 15 lines). + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.HNhag7 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-ld -Wl,--build-id=sha1' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd nco-5.1.8 + export CPPFLAGS=-I/usr/include/udunits2 + CPPFLAGS=-I/usr/include/udunits2 + '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']' ++ find . -type f -name configure -print + for file in $(find . -type f -name configure -print) + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2023-09-18 07:16:00.000000000 +0800 +++ ./configure 2024-09-23 17:29:07.136691438 +0800 @@ -1952,7 +1952,7 @@ #ifdef __cplusplus extern "C" #endif -char $2 (); +__attribute__ ((used)) char $2 (); /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ + /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2024-09-23 17:29:07.136691438 +0800 +++ ./configure 2024-09-23 17:29:07.192691640 +0800 @@ -8648,7 +8648,7 @@ # Transform an extracted symbol line into a proper C declaration. # Some systems (esp. on ia64) link data and code symbols differently, # so use this general approach. -lt_cv_sys_global_symbol_to_cdecl="sed -n"\ +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" $lt_cdecl_hook\ " -e 's/^T .* \(.*\)$/extern int \1();/p'"\ " -e 's/^$symcode$symcode* .* \(.*\)$/extern char \1;/p'" @@ -22691,7 +22691,7 @@ compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`' GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`' -lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`' +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./autobld/config.guess + '[' -f /usr/lib/rpm/OpenCloudOS/config.guess ']' + /usr/bin/rm -f ./autobld/config.guess ++ basename ./autobld/config.guess + /usr/bin/cp -fv /usr/lib/rpm/OpenCloudOS/config.guess ./autobld/config.guess '/usr/lib/rpm/OpenCloudOS/config.guess' -> './autobld/config.guess' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./autobld/config.sub + '[' -f /usr/lib/rpm/OpenCloudOS/config.sub ']' + /usr/bin/rm -f ./autobld/config.sub ++ basename ./autobld/config.sub + /usr/bin/cp -fv /usr/lib/rpm/OpenCloudOS/config.sub ./autobld/config.sub '/usr/lib/rpm/OpenCloudOS/config.sub' -> './autobld/config.sub' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-ld' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-ld"~' ./autobld/ltmain.sh + ./configure --build=aarch64-opencloudos-linux-gnu --host=aarch64-opencloudos-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info HAVE_ANTLR=yes --disable-dependency-tracking --includedir=/usr/include/nco checking build system type... aarch64-opencloudos-linux-gnu checking host system type... aarch64-opencloudos-linux-gnu checking target system type... aarch64-opencloudos-linux-gnu ./configure: line 3537: git: command not found checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for aarch64-opencloudos-linux-gnu-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking for flex... flex checking for lex output file root... lex.yy checking for lex library... none needed checking whether yytext is a pointer... yes checking whether ln -s works... yes checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert aarch64-opencloudos-linux-gnu file names to aarch64-opencloudos-linux-gnu format... func_convert_file_noop checking how to convert aarch64-opencloudos-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for aarch64-opencloudos-linux-gnu-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for aarch64-opencloudos-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for aarch64-opencloudos-linux-gnu-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for aarch64-opencloudos-linux-gnu-strip... no checking for strip... strip checking for aarch64-opencloudos-linux-gnu-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ./configure: line 8654: -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p': No such file or directory ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for aarch64-opencloudos-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking for working memcmp... yes checking whether lstat correctly handles trailing slash... yes checking whether stat accepts an empty string... no checking for working strtod... yes checking for canonicalize_file_name... yes checking for creat... yes checking for floor... no checking for gethostname... yes checking for getpagesize... yes checking for getrusage... yes checking for memchr... yes checking for memmove... yes checking for memset... yes checking for mkstemp... yes checking for pow... no checking for readlink... yes checking for realpath... yes checking for regcomp... yes checking for setlocale... yes checking for sqrt... no checking for strchr... yes checking for strerror... yes checking for strpbrk... yes checking for strrchr... yes checking for strstr... yes checking for strtol... yes checking for egrep... (cached) /usr/bin/grep -E checking for fcntl.h... yes checking for getopt.h... yes checking for libintl.h... yes checking for limits.h... yes checking for locale.h... yes checking for netinet/in.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for cstdlib... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for pid_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t in sys/types.h... yes checking for ptrdiff_t... yes checking size of int*... 8 checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no ################################# # Test for netCDF # ################################ checking for netcdf.h... yes checking for nc_open in -lnetcdf... yes ################################# # Test for netCDF4 support # ################################# checking for gcc options needed to detect all undeclared functions... none needed checking whether NC_CHUNKED is declared... yes configure: netcdf.h contains netCDF4 definitions checking for nc_def_var_chunking in -lnetcdf... yes configure: Good news: Simple program compiles and links to netCDF4 library checking for netcdf_mem.h... yes checking for gcc option to support OpenMP... -fopenmp configure: OpenMP support enabled Beginning generic tests for DAP support Testing for DAP-netCDF support (is DAP in libnetcdf.a?)... checking for daperror in -lnetcdf... yes configure: DAP support enabled checking for getopt_long... yes checking for sinf in -lsunmath... no checking for gettext in -lintl... no checking for res_init in -lresolv... no checking for main in -lsocket... no checking for main in -lthread... no checking for nco_open in -lnco... no checking for nc_inq_format... yes checking for nc_inq_path... yes checking for nc_set_log_level... yes checking for nc_rename_grp... yes checking for getopt... yes checking for getopt_long... (cached) yes checking for atan2... no checking for acosf... no checking for asinf... no checking for atanf... no checking for atan2f... no checking for cosf... no checking for expf... no checking for fabsf... no checking for fmodf... no checking for log10f... no checking for logf... no checking for powf... no checking for sinf... no checking for sqrtf... no checking for tanf... no checking for erff... no checking for erfcf... no checking for gammaf... no checking for acoshf... no checking for asinhf... no checking for atanhf... no checking for coshf... no checking for sinhf... no checking for tanhf... no checking for ceilf... no checking for floorf... no checking for nearbyint... no checking for rint... no checking for round... no checking for trunc... no checking for nearbyintf... no checking for rintf... no checking for roundf... no checking for truncf... no checking for getopt_long... (cached) yes checking for strdup... yes checking for strcasecmp... yes checking for strsep... yes checking for strcasestr... yes checking for htonl... yes checking for htons... yes checking for ntohl... yes checking for ntohs... yes checking for __builtin_bswap16... no checking for __builtin_bswap32... no checking for __builtin_bswap64... no ########################################################## # Sorting out MacOS build parameters # ########################################################## ################################# # Testing for ANTLR support # ################################# checking for runantlr... yes configure: antlr library was found checking for antlr/CommonToken.hpp... yes INFO: ANTLR development support found---will build nco++ directory and ncap2 checking whether NCO C++ interface library libnco_c++ should be built... no ######################################## # Testing for GSL support # ######################################## configure: These GSL library and header tests must succeed for GSL support: checking for gsl_sf_gamma_inc in -lgsl... yes checking for /usr/include/gsl/gsl_sf_gamma.h... yes configure: GSL support enabled ######################################## # Testing for CCR support # ######################################## checking where to put HDF5 plugins... . checking whether Community Codec Repository library should be used... no checking for regex.h... yes checking for sys/types.h... (cached) yes checking for regexec... yes checking for regcomp... (cached) yes checking for regfree... yes ######################################## # Testing for UDUNITS2 support # ######################################## checking for udunits2.h... yes checking for library containing ut_parse... -ludunits2 configure: UDUnits2 support enabled checking for ncgen... /usr/bin/ncgen configure: Creating sample netCDF data files for self-tests ############################### # Require Shared Libs? # ############################### checking for makeinfo... yes MAKEINFO_VERSION=7.0.3 configure: Documentation support enabled checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating data/Makefile config.status: creating src/Makefile config.status: creating src/nco/Makefile config.status: creating man/Makefile config.status: creating src/nco++/Makefile config.status: creating doc/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands Configuration Parameters: AR_FLAGS............. cru CC................... gcc CFLAGS............... -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 CPP.................. gcc -E CPPFLAGS............. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include CXX.................. g++ CXXFLAGS............. -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection ENABLE_CCR........... no ENABLE_DAP........... yes ENABLE_GSL........... yes ENABLE_NETCDF4....... yes ENABLE_OPENMP........ yes ENABLE_UDUNITS2...... yes GSL_ROOT............. /usr HAVE_ANTLR........... yes HAVE_MAKEINFO........ yes HAVE_NETCDF4_H....... yes HDF5_PLUGIN_PATH..... . HOST................. HOSTNAME............. builder2.aarch64.opencloudos.tech LDFLAGS.............. -L/usr/lib64 -lnetcdf -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-ld -Wl,--build-id=sha1 LIBS................. -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -lgsl -lgslcblas -lm NETCDF_ROOT.......... /usr OPENMP_CFLAGS........ -fopenmp host................. aarch64-opencloudos-linux-gnu install prefix ...... /usr ******************************************************************* Configuration complete. You are now ready to run 'make'. Ensure 'make' points to GNU Make (AT&T Make chokes on GNU syntax). If the build fails, please examine the file 'configure.eg' in the top-level NCO directory. It contains examples known to build NCO for various platforms and compilers. ******************************************************************* + /usr/bin/make -O -j8 V=1 VERBOSE=1 /usr/bin/make all-recursive Making all in data make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' /usr/bin/ncgen -o big.nc big.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' /builddir/build/BUILD/nco-5.1.8/src/nco/ncks -O -7 --cnk_dmn time,10 in.nc in_4c.nc make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' make[2]: /builddir/build/BUILD/nco-5.1.8/src/nco/ncks: No such file or directory make[2]: [Makefile:585: in_4c.nc] Error 127 (ignored) make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' /usr/bin/ncgen -o in_rec_zero.nc in_rec_zero.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' /usr/bin/ncgen -k netCDF-4 -o in_grp_8.nc in_grp_8.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' /usr/bin/ncgen -k netCDF-4 -o hdn.nc hdn.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' /usr/bin/ncgen -k netCDF-4 -o mrd.nc mrd.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' /usr/bin/ncgen -k netCDF-4 -o split.nc split.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' /usr/bin/ncgen -k netCDF-4 -o ref_utf8.nc ref_utf8.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' /usr/bin/ncgen -k netCDF-4 -o in_4.nc in_4.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' /usr/bin/ncgen -k netCDF-4 -lb -o "file://in_zarr4#mode=nczarr,file" in_zarr4.cdl make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' ncgen: NetCDF: NCZarr error (../../ncgen/genbin.c:genbin_netcdf:168) make[2]: [Makefile:657: in_zarr4] Error 1 (ignored) make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' ln -s -f in_zarr4 h0001 make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' ln -s -f in_zarr4 h0002 make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' ln -s -f in_zarr4 h0003 make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' Making all in src Making all in nco make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o ncatted.o ncatted.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_bnr.lo nco_bnr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_bnr.c -fPIC -DPIC -o .libs/nco_bnr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_bnr.c -o nco_bnr.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_cnv_arm.lo nco_cnv_arm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_cnv_arm.c -fPIC -DPIC -o .libs/nco_cnv_arm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_cnv_arm.c -o nco_cnv_arm.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_aux.lo nco_aux.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_aux.c -fPIC -DPIC -o .libs/nco_aux.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_aux.c -o nco_aux.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_cnf_dmn.lo nco_cnf_dmn.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_cnf_dmn.c -fPIC -DPIC -o .libs/nco_cnf_dmn.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_cnf_dmn.c -o nco_cnf_dmn.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_cln_utl.lo nco_cln_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_cln_utl.c -fPIC -DPIC -o .libs/nco_cln_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_cln_utl.c -o nco_cln_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_cln_utl.c: In function 'nco_cln_var_prs': nco_cln_utl.c:1339:27: warning: 'mss_val_flt' may be used uninitialized [-Wmaybe-uninitialized] 1339 | if(var->has_mss_val && var->val.fp[idx] == mss_val_flt){ | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_cln_utl.c:1335:11: note: 'mss_val_flt' was declared here 1335 | float mss_val_flt; | ^~~~~~~~~~~ nco_cln_utl.c:1320:27: warning: 'mss_val_dbl' may be used uninitialized [-Wmaybe-uninitialized] 1320 | if(var->has_mss_val && var->val.dp[idx] == mss_val_dbl){ | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_cln_utl.c:1316:12: note: 'mss_val_dbl' was declared here 1316 | double mss_val_dbl; | ^~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_dbg.lo nco_dbg.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_dbg.c -fPIC -DPIC -o .libs/nco_dbg.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_dbg.c -o nco_dbg.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_cnv_csm.lo nco_cnv_csm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_cnv_csm.c -fPIC -DPIC -o .libs/nco_cnv_csm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_cnv_csm.c -o nco_cnv_csm.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' In file included from /usr/include/stdio.h:964, from nco_cnv_csm.h:17, from nco_cnv_csm.c:10: In function 'fprintf', inlined from 'nco_cnv_cf_cll_mth_add' at nco_cnv_csm.c:517:48: /usr/include/bits/stdio2.h:79:10: warning: 'cll_mth_clm' may be used uninitialized [-Wmaybe-uninitialized] 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_cnv_csm.c: In function 'nco_cnv_cf_cll_mth_add': nco_cnv_csm.c:449:9: note: 'cll_mth_clm' was declared here 449 | char *cll_mth_clm; /* [sng] Cell methods for climatology */ | ^~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_crt.lo nco_crt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_crt.c -fPIC -DPIC -o .libs/nco_crt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_crt.c -o nco_crt.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_cnk.lo nco_cnk.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_cnk.c -fPIC -DPIC -o .libs/nco_cnk.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_cnk.c -o nco_cnk.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' In file included from /usr/include/stdio.h:964, from nco_cnk.h:18, from nco_cnk.c:45: In function 'fprintf', inlined from 'nco_cnk_sz_set_trv' at nco_cnk.c:1330:8: /usr/include/bits/stdio2.h:79:10: warning: 'prt_sum' may be used uninitialized [-Wmaybe-uninitialized] 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_cnk.c: In function 'nco_cnk_sz_set_trv': nco_cnk.c:1305:12: note: 'prt_sum' was declared here 1305 | size_t prt_sum; /* [nbr] Partial sum (sum of coefficients times powers of two for higher powers */ | ^~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_dmn_utl.lo nco_dmn_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_dmn_utl.c -fPIC -DPIC -o .libs/nco_dmn_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_dmn_utl.c -o nco_dmn_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_att_utl.lo nco_att_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_att_utl.c -fPIC -DPIC -o .libs/nco_att_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_att_utl.c -o nco_att_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_cnf_typ.lo nco_cnf_typ.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_cnf_typ.c -fPIC -DPIC -o .libs/nco_cnf_typ.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_cnf_typ.c -o nco_cnf_typ.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_ctl.lo nco_ctl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_ctl.c -fPIC -DPIC -o .libs/nco_ctl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_ctl.c -o nco_ctl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_lst_utl.lo nco_lst_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_lst_utl.c -fPIC -DPIC -o .libs/nco_lst_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_lst_utl.c -o nco_lst_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_lst_utl.c: In function 'nco_fmt_sng_printf_subst': nco_lst_utl.c:38:89: warning: unknown escape sequence: '\.' 38 | const char rx_sng[]="%([+-0#'I])?([0-9]*)?([\.?[0-9]*)?([h+l+Ljzt])?[bcdeEfFgGiosuxX]"; /* [sng] Regular expression pattern */ | ^ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_flt.lo nco_flt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_flt.c -fPIC -DPIC -o .libs/nco_flt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_flt.c -o nco_flt.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_flt.c: In function 'nco_flt_hdf5_prs': nco_flt.c:395:28: warning: array subscript 'unsigned int[0]' is partly outside array bounds of 'short int[1]' [-Warray-bounds] 395 | u32_lst[u32_nbr++]=*ui32p; | ^~~~~~ nco_flt.c:392:15: note: object 'sht_foo' of size 2 392 | short sht_foo=(short)strtol(prm_lst[prm_idx],&sng_cnv_rcd,NCO_SNG_CNV_BASE10); | ^~~~~~~ nco_flt.c:389:28: warning: array subscript 'unsigned int[0]' is partly outside array bounds of 'short unsigned int[1]' [-Warray-bounds] 389 | u32_lst[u32_nbr++]=*ui32p; | ^~~~~~ nco_flt.c:386:24: note: object 'usht_foo' of size 2 386 | unsigned short usht_foo=(unsigned short)strtoul(prm_lst[prm_idx],&sng_cnv_rcd,NCO_SNG_CNV_BASE10); | ^~~~~~~~ nco_flt.c:330:37: warning: '%s' directive argument is null [-Wformat-overflow=] 330 | (void)fprintf(stderr,"%s: ERROR %s reports supplied filter string is empty\n",nco_prg_nm_get(),flt_sng); | ^~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_kd.lo nco_kd.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_kd.c -fPIC -DPIC -o .libs/nco_kd.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_kd.c -o nco_kd.o >/dev/null 2>&1 make[3]: Leaving directory 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compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_grp_trv.c -o nco_grp_trv.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_fl_utl.lo nco_fl_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_fl_utl.c -fPIC -DPIC -o .libs/nco_fl_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_fl_utl.c -o nco_fl_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_fl_utl.c: In function 'nco_fl_nm_prs': nco_fl_utl.c:1754:45: warning: '%d' directive writing between 1 and 11 bytes into a region of size 8 [-Wformat-overflow=] 1754 | (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2); | ^~ nco_fl_utl.c:1754:41: note: directive argument in the range [-2147483648, 2147483645] 1754 | (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2); | ^~~~~~~~~~~~~ In file included from /usr/include/stdio.h:964, from nco_fl_utl.h:26, from nco_fl_utl.c:10: In function 'sprintf', inlined from 'nco_fl_nm_prs' at nco_fl_utl.c:1754:8: /usr/include/bits/stdio2.h:30:10: note: '__sprintf_chk' output between 9 and 19 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:548, from nco_fl_utl.h:28: In function 'strncpy', inlined from 'nco_fl_mk_lcl' at nco_fl_utl.c:1445:13: /usr/include/bits/string_fortified.h:95:10: warning: 'strncpy' destination unchanged after copying no bytes [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ nco_fl_utl.c: In function 'nco_fl_ncz2psx': nco_fl_utl.c:2595:29: warning: 'psx_fll_lcl' may be used uninitialized [-Wmaybe-uninitialized] 2595 | if(psx_fll) psx_fll_lcl=(char *)strdup(psx_fll_lcl); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_fl_utl.c:2518:11: note: 'psx_fll_lcl' was declared here 2518 | char *psx_fll_lcl; /* O [sng] Full POSIX path with filename, suitable for file stat() */ | ^~~~~~~~~~~ nco_fl_utl.c:2607:25: warning: 'psx_drc_lcl' may be used uninitialized [-Wmaybe-uninitialized] 2607 | if(psx_drc) *psx_drc=psx_drc_lcl; | ~~~~~~~~^~~~~~~~~~~~ nco_fl_utl.c:2519:11: note: 'psx_drc_lcl' was declared here 2519 | char *psx_drc_lcl; /* O [sng] POSIX path only, no filename, suitable for directory stat() */ | ^~~~~~~~~~~ nco_fl_utl.c:2608:25: warning: 'psx_stb_lcl' may be used uninitialized [-Wmaybe-uninitialized] 2608 | if(psx_stb) *psx_stb=psx_stb_lcl; | ~~~~~~~~^~~~~~~~~~~~ nco_fl_utl.c:2520:11: note: 'psx_stb_lcl' was declared here 2520 | char *psx_stb_lcl; /* O [sng] POSIX filename (stub) without path or suffix, suitable for netCDF dataset name */ | ^~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_mmr.lo nco_mmr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_mmr.c -fPIC -DPIC -o .libs/nco_mmr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_mmr.c -o nco_mmr.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS 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-I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_mta.c -fPIC -DPIC -o .libs/nco_mta.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_mta.c -o nco_mta.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_mss_val.lo nco_mss_val.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 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.libs/nco_omp.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_omp.c -o nco_omp.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_msa.lo nco_msa.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_msa.c -fPIC -DPIC -o .libs/nco_msa.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_msa.c -o nco_msa.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_pck.lo nco_pck.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_pck.c -fPIC -DPIC -o .libs/nco_pck.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_pck.c -o nco_pck.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_pck.c: In function 'nco_pck_map_get': nco_pck.c:160:88: warning: '%s' directive argument is null [-Wformat-overflow=] 160 | (void)fprintf(stderr,"%s: ERROR %s reports empty user-specified packing map string %s\n",nco_prg_nm,fnc_nm,nco_pck_map_sng); | ^~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_ply.lo nco_ply.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_ply.c -fPIC -DPIC -o .libs/nco_ply.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_ply.c -o nco_ply.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_ppc.lo nco_ppc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_ppc.c -fPIC -DPIC -o .libs/nco_ppc.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_ppc.c -o nco_ppc.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_ppc.c: In function 'nco_ppc_bitmask': nco_ppc.c:1087:51: warning: 'u64_ptr' may be used uninitialized [-Wmaybe-uninitialized] 1087 | if(op1.dp[idx] != mss_val_cmp_dbl) u64_ptr[idx]&=msk_f64_u64_zro; | ~~~~~~~^~~~~ nco_ppc.c:678:27: note: 'u64_ptr' was declared here 678 | unsigned long long int *u64_ptr; | ^~~~~~~ nco_ppc.c:825:51: warning: 'u32_ptr' may be used uninitialized [-Wmaybe-uninitialized] 825 | if(op1.fp[idx] != mss_val_cmp_flt) u32_ptr[idx]&=msk_f32_u32_zro; | ~~~~~~~^~~~~ nco_ppc.c:674:17: note: 'u32_ptr' was declared here 674 | unsigned int *u32_ptr; | ^~~~~~~ nco_ppc.c:1021:55: warning: 'mss_val_cmp_flt' may be used uninitialized [-Wmaybe-uninitialized] 1021 | if(op1.fp[idx] != 0.0f && op1.fp[idx] != 1.0f && op1.fp[idx] != mss_val_cmp_flt){ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_ppc.c:662:9: note: 'mss_val_cmp_flt' was declared here 662 | float mss_val_cmp_flt; /* Missing value for comparison to single precision values */ | ^~~~~~~~~~~~~~~ nco_ppc.c:1192:53: warning: 'mss_val_cmp_dbl' may be used uninitialized [-Wmaybe-uninitialized] 1192 | if(op1.dp[idx] != 0.0 && op1.dp[idx] != 1.0 && op1.dp[idx] != mss_val_cmp_dbl){ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_ppc.c:660:10: note: 'mss_val_cmp_dbl' was declared here 660 | double mss_val_cmp_dbl; /* Missing value for comparison to double precision values */ | ^~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_rec_var.lo nco_rec_var.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_rec_var.c -fPIC -DPIC -o .libs/nco_rec_var.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_rec_var.c -o nco_rec_var.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_map.lo nco_map.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_map.c -fPIC -DPIC -o .libs/nco_map.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_map.c -o nco_map.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_map.c: In function 'nco_map_mk': nco_map.c:302:12: warning: variable 'flg_grd_out_rct' set but not used [-Wunused-but-set-variable] 302 | nco_bool flg_grd_out_rct=False; /* [flg] Rectangular coordinates */ | ^~~~~~~~~~~~~~~ nco_map.c:300:12: warning: variable 'flg_grd_in_rct' set but not used [-Wunused-but-set-variable] 300 | nco_bool flg_grd_in_rct=False; /* [flg] Rectangular coordinates */ | ^~~~~~~~~~~~~~ nco_map.c:231:7: warning: variable 'bnd_nbr_out' set but not used [-Wunused-but-set-variable] 231 | int bnd_nbr_out; /* [nbr] Number of vertices for destination grid coordinates */ | ^~~~~~~~~~~ nco_map.c:213:8: warning: variable 'col_nbr_in' set but not used [-Wunused-but-set-variable] 213 | long col_nbr_in; /* [idx] Number of columns in source grid */ | ^~~~~~~~~~ nco_map.c:212:7: warning: variable 'bnd_nbr_in' set but not used [-Wunused-but-set-variable] 212 | int bnd_nbr_in; /* [nbr] Number of vertices for source grid coordinates */ | ^~~~~~~~~~ nco_map.c:402:15: warning: 'lon_nbr_in' may be used uninitialized [-Wmaybe-uninitialized] 402 | if(idx%lon_nbr_in == 0) idx_tst=idx; | ~~~^~~~~~~~~~~ nco_map.c:214:8: note: 'lon_nbr_in' was declared here 214 | long lon_nbr_in; /* [idx] Number of longitudes in source grid */ | ^~~~~~~~~~ nco_map.c:418:15: warning: 'lon_nbr_out' may be used uninitialized [-Wmaybe-uninitialized] 418 | if(idx%lon_nbr_out == 0) idx_tst=idx; | ~~~^~~~~~~~~~~~ nco_map.c:233:8: note: 'lon_nbr_out' was declared here 233 | long lon_nbr_out; /* [nbr] Number of longitudes in destination grid */ | ^~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_ply_lst.lo nco_ply_lst.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_ply_lst.c -fPIC -DPIC -o .libs/nco_ply_lst.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_ply_lst.c -o nco_ply_lst.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_ply_lst.c: In function 'nco_poly_lst_mk_vrl_crt': nco_ply_lst.c:608:10: warning: variable 'size' set but not used [-Wunused-but-set-variable] 608 | kd_box size; | ^~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_netcdf.lo nco_netcdf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_netcdf.c -fPIC -DPIC -o .libs/nco_netcdf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_netcdf.c -o nco_netcdf.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_rth_flt.lo nco_rth_flt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_rth_flt.c -fPIC -DPIC -o .libs/nco_rth_flt.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_rth_flt.c -o nco_rth_flt.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_scl_utl.lo nco_scl_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_scl_utl.c -fPIC -DPIC -o .libs/nco_scl_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_scl_utl.c -o nco_scl_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_rth_utl.lo nco_rth_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_rth_utl.c -fPIC -DPIC -o .libs/nco_rth_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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-std=gnu11 -c -o nco_scm.lo nco_scm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_scm.c -fPIC -DPIC -o .libs/nco_scm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_scm.c -o nco_scm.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_sld.lo nco_sld.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall 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--tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_srm.lo nco_srm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_srm.c -fPIC -DPIC -o .libs/nco_srm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_srm.c -o nco_srm.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_sng_utl.lo nco_sng_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_sng_utl.c -fPIC -DPIC -o .libs/nco_sng_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_sng_utl.c -o nco_sng_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_sng_utl.c: In function 'nm2sng_cdl': nco_sng_utl.c:270:41: warning: '__snprintf_chk' output truncated before the last format character [-Wformat-truncation=] 270 | snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr); | ^ In file included from /usr/include/stdio.h:964, from nco_sng_utl.h:21, from nco_sng_utl.c:10: In function 'snprintf', inlined from 'nm2sng_cdl' at nco_sng_utl.c:270:2: /usr/include/bits/stdio2.h:54:10: note: '__snprintf_chk' output 5 bytes into a destination of size 4 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_sng_utl.c: In function 'nm2sng_fl': nco_sng_utl.c:466:41: warning: '__snprintf_chk' output truncated before the last format character [-Wformat-truncation=] 466 | snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr); | ^ In function 'snprintf', inlined from 'nm2sng_fl' at nco_sng_utl.c:466:2: /usr/include/bits/stdio2.h:54:10: note: '__snprintf_chk' output 5 bytes into a destination of size 4 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_s1d.lo nco_s1d.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_s1d.c -fPIC -DPIC -o .libs/nco_s1d.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_s1d.c -o nco_s1d.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_s1d.c: In function 'nco_s1d_unpack': nco_s1d.c:383:9: warning: variable 'lon_dmn_nm_out' set but not used [-Wunused-but-set-variable] 383 | char *lon_dmn_nm_out; | ^~~~~~~~~~~~~~ nco_s1d.c:382:9: warning: variable 'lat_dmn_nm_out' set but not used [-Wunused-but-set-variable] 382 | char *lat_dmn_nm_out; | ^~~~~~~~~~~~~~ nco_s1d.c:353:10: warning: variable 'grd_sz_in' set but not used [-Wunused-but-set-variable] 353 | size_t grd_sz_in; /* [nbr] Number of elements in single layer of input grid */ | ^~~~~~~~~ nco_s1d.c:45:9: warning: variable 'fl_out' set but not used [-Wunused-but-set-variable] 45 | char *fl_out; | ^~~~~~ nco_s1d.c:857:45: warning: 'fl_tpl' may be used uninitialized [-Wmaybe-uninitialized] 857 | if(FL_RTR_RMT_LCN && RM_RMT_FL_PST_PRC) (void)nco_fl_rm(fl_tpl); | ^~~~~~~~~~~~~~~~~~~~~~~ nco_s1d.c:46:9: note: 'fl_tpl' was declared here 46 | char *fl_tpl; /* [sng] Template file (contains horizontal grid) */ | ^~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_var_scv.lo nco_var_scv.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_var_scv.c -fPIC -DPIC -o .libs/nco_var_scv.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_var_scv.c -o nco_var_scv.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_var_avg.lo nco_var_avg.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_var_avg.c -fPIC -DPIC -o .libs/nco_var_avg.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_var_avg.c -o nco_var_avg.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o ncbo.o ncbo.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_sph.lo nco_sph.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_sph.c -fPIC -DPIC -o .libs/nco_sph.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_sph.c -o nco_sph.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_sph.c: In function 'nco_sph_seg_int_old': nco_sph.c:508:10: warning: variable 'nx_ci' set but not used [-Wunused-but-set-variable] 508 | double nx_ci; | ^~~~~ nco_sph.c:506:10: warning: variable 'nx3' set but not used [-Wunused-but-set-variable] 506 | double nx3; | ^~~ nco_sph.c:505:10: warning: variable 'nx2' set but not used [-Wunused-but-set-variable] 505 | double nx2; | ^~~ nco_sph.c: In function 'nco_sph_seg_parallel': nco_sph.c:1426:10: warning: variable 'nx3' set but not used [-Wunused-but-set-variable] 1426 | double nx3; | ^~~ nco_sph.c:1425:10: warning: variable 'nx2' set but not used [-Wunused-but-set-variable] 1425 | double nx2; | ^~~ nco_sph.c:1424:10: warning: variable 'nx1' set but not used [-Wunused-but-set-variable] 1424 | double nx1; | ^~~ nco_sph.c: In function 'nco_sph_seg_vrt_int': nco_sph.c:1836:10: warning: variable 'nx_av' set but not used [-Wunused-but-set-variable] 1836 | double nx_av; | ^~~~~ nco_sph.c:1835:10: warning: variable 'nx_ab' set but not used [-Wunused-but-set-variable] 1835 | double nx_ab; | ^~~~~ nco_sph.c: In function 'nco_sph_is_convex': nco_sph.c:2469:8: warning: variable 'n1' set but not used [-Wunused-but-set-variable] 2469 | double n1; | ^~ nco_sph.c: In function 'nco_rll_intersect': nco_sph.c:3302:10: warning: variable 'nx2' set but not used [-Wunused-but-set-variable] 3302 | double nx2; | ^~~ nco_sph.c:3301:10: warning: variable 'nx1' set but not used [-Wunused-but-set-variable] 3301 | double nx1; | ^~~ In file included from /usr/include/stdio.h:964, from nco_sph.h:61, from nco_sph.c:49: In function 'fprintf', inlined from 'nco_sph_seg_int_old' at nco_sph.c:584:5: /usr/include/bits/stdio2.h:79:10: warning: 'nx_ai' may be used uninitialized [-Wmaybe-uninitialized] 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_sph.c: In function 'nco_sph_seg_int_old': nco_sph.c:507:10: note: 'nx_ai' was declared here 507 | double nx_ai; | ^~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_var_rth.lo nco_var_rth.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_var_rth.c -fPIC -DPIC -o .libs/nco_var_rth.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_var_rth.c -o nco_var_rth.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_var_rth.c: In function 'nco_var_sbt': nco_var_rth.c:3726:25: warning: 'tm_srt' may be used uninitialized [-Wmaybe-uninitialized] 3726 | tm_drn=1.0e6*(tm_end-tm_srt)/CLOCKS_PER_SEC; | ~~~~~~~^~~~~~~~ nco_var_rth.c:3539:11: note: 'tm_srt' was declared here 3539 | clock_t tm_srt; | ^~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_var_lst.lo nco_var_lst.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_var_lst.c -fPIC -DPIC -o .libs/nco_var_lst.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_var_lst.c -o nco_var_lst.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o ncecat.o ncecat.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' ncecat.c: In function 'main': ncecat.c:842:17: warning: 'strncpy' specified bound depends on the length of the source argument [-Wstringop-truncation] 842 | gpe_arg=strncpy(gpe_arg,stb_srt_psn,strlen(stb_srt_psn)-sfx_lng); | ^ ncecat.c:842:45: note: length computed here 842 | gpe_arg=strncpy(gpe_arg,stb_srt_psn,strlen(stb_srt_psn)-sfx_lng); | ^~~~~~~~~~~~~~~~~~~ ncecat.c:800:30: warning: '%02d' directive writing between 2 and 10 bytes into a region of size 3 [-Wformat-overflow=] 800 | sprintf(grp_out_sfx,"%02d",fl_idx); | ^~~~ ncecat.c:800:29: note: directive argument in the range [0, 2147483646] 800 | sprintf(grp_out_sfx,"%02d",fl_idx); | ^~~~~~ In file included from /usr/include/stdio.h:964, from ncecat.c:46: In function 'sprintf', inlined from 'main' at ncecat.c:800:9: /usr/include/bits/stdio2.h:30:10: note: '__sprintf_chk' output between 3 and 11 bytes into a destination of size 3 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ncecat.c: In function 'main': ncecat.c:218:10: warning: 'grp_out_lng' may be used uninitialized [-Wmaybe-uninitialized] 218 | size_t grp_out_lng; /* [nbr] Length of original, canonicalized GPE specification filename component */ | ^~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o ncflint.o ncflint.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_grp_utl.lo nco_grp_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_grp_utl.c -fPIC -DPIC -o .libs/nco_grp_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_grp_utl.c -o nco_grp_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o ncpdq.o ncpdq.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o ncrename.o ncrename.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_var_utl.lo nco_var_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_var_utl.c -fPIC -DPIC -o .libs/nco_var_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_var_utl.c -o nco_var_utl.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o ncap_utl.o ncap_utl.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' test -f ncap_lex.c || /bin/sh ../../autobld/ylwrap ncap_lex.l lex.nco_yy.c ncap_lex.c -- flex -Pnco_yy make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o ncks.o ncks.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' ncks.c: In function 'main': ncks.c:199:8: warning: 'in_id_arr' may be used uninitialized [-Wmaybe-uninitialized] 199 | int *in_id_arr; /* [id] netCDF file IDs used by OpenMP code */ | ^~~~~~~~~ ncks.c:1596:51: warning: 'fl_lst_in' may be used uninitialized [-Wmaybe-uninitialized] 1596 | if(fl_lst_in && fl_lst_abb == NULL) fl_lst_in=nco_sng_lst_free(fl_lst_in,fl_nbr); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ncks.c:124:10: note: 'fl_lst_in' was declared here 124 | char **fl_lst_in; | ^~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o ncwa.o ncwa.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o ncra.o ncra.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o ncap_lex.o ncap_lex.c make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' ncap_lex.c:2978:16: warning: 'input' defined but not used [-Wunused-function] 2978 | #else | ^ ncap_lex.l: In function 'nco_yylex': ncap_lex.l:611:34: warning: '%s' directive writing up to 255 bytes into a region of size 147 [-Wformat-overflow=] 611 | (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In file included from /usr/include/stdio.h:964, from ncap_lex.c:277: In function 'sprintf', inlined from 'nco_yylex' at ncap_lex.l:611:13: /usr/include/bits/stdio2.h:30:10: note: '__sprintf_chk' output 98 or more bytes (assuming 353) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ncap_lex.l: In function 'nco_yylex': ncap_lex.l:587:36: warning: '%s' directive writing up to 255 bytes into a region of size 147 [-Wformat-overflow=] 587 | (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In function 'sprintf', inlined from 'nco_yylex' at ncap_lex.l:587:8: /usr/include/bits/stdio2.h:30:10: note: '__sprintf_chk' output 98 or more bytes (assuming 353) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ncap_lex.l: In function 'nco_yylex': ncap_lex.l:634:34: warning: '%s' directive writing up to 255 bytes into a region of size 164 [-Wformat-overflow=] 634 | (void)sprintf(ncap_err_sng,"#Warning: unable to locate variable %s. So cannot create attribute %s",var_nm,yytext); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In function 'sprintf', inlined from 'nco_yylex' at ncap_lex.l:634:13: /usr/include/bits/stdio2.h:30:10: note: '__sprintf_chk' output 66 or more bytes (assuming 321) into a destination of size 200 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_prn.lo nco_prn.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_prn.c -fPIC -DPIC -o .libs/nco_prn.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_prn.c -o nco_prn.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_prn.c: In function 'nco_prn_var_val_lmt': nco_prn.c:1649:53: warning: '%s' directive writing up to 99 bytes into a region of size 86 [-Wformat-overflow=] 1649 | (void)sprintf(var_sng,"%%s%c%%ld--%%ld%c='%s' %%s",arr_lft_dlm,arr_rgt_dlm,dmn_sng); | ^~ ~~~~~~~ In file included from /usr/include/stdio.h:964, from nco_prn.h:22, from nco_prn.c:10: In function 'sprintf', inlined from 'nco_prn_var_val_lmt' at nco_prn.c:1649:10: /usr/include/bits/stdio2.h:30:10: note: '__sprintf_chk' output between 19 and 118 bytes into a destination of size 100 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_prn.c: In function 'nco_prn_var_dfn': nco_prn.c:1927:34: warning: 'vln_lng_avg' may be used uninitialized [-Wmaybe-uninitialized] 1927 | if(cls_typ == NC_VLEN) (void)fprintf(fp_out,"%*s%s size (RAM) = %s = %li*%g*%lu = %lu bytes\n",prn_ndn,spc_sng,var_trv->nm,sz_sng,var_sz,vln_lng_avg,(unsigned long)nco_typ_lng_udt(nc_id,bs_typ),(unsigned long)ram_sz_crr); else (void)fprintf(fp_out,"%*s%s size (RAM) = %s = %li*%lu = %lu bytes\n",prn_ndn,spc_sng,var_trv->nm,sz_sng,var_sz,(unsigned long)nco_typ_lng_udt(nc_id,bs_typ),(unsigned long)ram_sz_crr); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_prn.c:1726:9: note: 'vln_lng_avg' was declared here 1726 | float vln_lng_avg; /* [nbr] Mean vlen length */ | ^~~~~~~~~~~ nco_prn.c: In function 'nco_prn_att': nco_prn.c:807:15: warning: 'mbr_val' may be used uninitialized [-Wmaybe-uninitialized] 807 | rcd=nco_inq_enum_ident(grp_id,att[idx].type,mbr_val,mbr_nm); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_prn.c:478:15: note: 'mbr_val' was declared here 478 | long long mbr_val; | ^~~~~~~ nco_prn.c: In function 'nco_prn_var_val_trv': nco_prn.c:2577:74: warning: 'vln_lngm1' may be used uninitialized [-Wmaybe-uninitialized] 2577 | case NC_UINT64: for(vln_idx=0;vln_idxtype,mbr_val,mbr_nm); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_prn.c:2389:15: note: 'mbr_val' was declared here 2389 | long long mbr_val; | ^~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c -o nco_rgr.lo nco_rgr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_rgr.c -fPIC -DPIC -o .libs/nco_rgr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=gnu11 -c nco_rgr.c -o nco_rgr.o >/dev/null 2>&1 make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' nco_rgr.c: In function 'nco_ntp_vrt._omp_fn.0': nco_rgr.c:3611:23: warning: 'FIRST_WARNING_LHS' may be used uninitialized [-Wmaybe-uninitialized] 3611 | if(FIRST_WARNING_LHS) (void)fprintf(fp_stdout,"%s: INFO %s geopotential height extrapolated upward towards space using hypsometric equation with constant global mean virtual temperature = %g for variable %s\n",nco_prg_nm_get(),fnc_nm,tpt_vrt_avg,var_nm); | ^ nco_rgr.c:3495:20: note: 'FIRST_WARNING_LHS' was declared here 3495 | nco_bool FIRST_WARNING_LHS; /* [flg] First warning for LHS extrapolation */ | ^~~~~~~~~~~~~~~~~ nco_rgr.c:3677:23: warning: 'FIRST_WARNING_RHS' may be used uninitialized [-Wmaybe-uninitialized] 3677 | if(FIRST_WARNING_RHS) (void)fprintf(fp_stdout,"%s: INFO %s temperature extrapolated toward/into surface assuming constant moist adiabatic lapse rate = %g K/(100 hPa) for variable %s\n",nco_prg_nm_get(),fnc_nm,gamma_moist*10000.0,var_nm); | ^ nco_rgr.c:3496:20: note: 'FIRST_WARNING_RHS' was declared here 3496 | nco_bool FIRST_WARNING_RHS; /* [flg] First warning for RHS extrapolation */ | ^~~~~~~~~~~~~~~~~ nco_rgr.c:3547:37: warning: 'dat_in_mnt' may be used uninitialized [-Wmaybe-uninitialized] 3547 | dat_in_mnt[in_idx]=dat_in[in_nbr-in_idx-1]; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:3431:19: note: 'dat_in_mnt' was declared here 3431 | double *dat_in_mnt; /* Input data (to be interpolated) reversed if necessary along with input grid */ | ^~~~~~~~~~ nco_rgr.c:3546:37: warning: 'crd_in_mnt' may be used uninitialized [-Wmaybe-uninitialized] 3546 | crd_in_mnt[in_idx]=crd_in[in_nbr-in_idx-1]; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:3429:19: note: 'crd_in_mnt' was declared here 3429 | double *crd_in_mnt; /* Input vertical coordinate reversed if necessary to be monotonically increasing */ | ^~~~~~~~~~ nco_rgr.c:3432:19: warning: 'dat_out_mnt' may be used uninitialized [-Wmaybe-uninitialized] 3432 | double *dat_out_mnt; /* Output data (interpolated) reversed if necessary along with output grid */ | ^~~~~~~~~~~ nco_rgr.c:3556:39: warning: 'crd_out_mnt' may be used uninitialized [-Wmaybe-uninitialized] 3556 | crd_out_mnt[out_idx]=crd_out[out_nbr-out_idx-1]; | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:3430:19: note: 'crd_out_mnt' was declared here 3430 | double *crd_out_mnt; /* Output vertical coordinate reversed if necessary to be monotonically increasing */ | ^~~~~~~~~~~ nco_rgr.c: In function 'nco_rgr_ini': nco_rgr.c:546:9: warning: 'cnv_nbr' may be used uninitialized [-Wmaybe-uninitialized] 546 | if(cnv_nbr != 4) cnv_nbr=sscanf(rgr_lst[rgr_var_idx].val,"%lf,%lf,%lf,%lf",&rgr->lon_wst,&rgr->lon_est,&rgr->lat_sth,&rgr->lat_nrt); | ^ nco_rgr.c:263:7: note: 'cnv_nbr' was declared here 263 | int cnv_nbr; /* [nbr] Number of elements converted by sscanf() */ | ^~~~~~~ nco_rgr.c: In function 'nco_lat_wgt_gss': nco_rgr.c:7102:13: warning: 'sp' may be used uninitialized [-Wmaybe-uninitialized] 7102 | (void)fprintf(stdout,"%s: ERROR %s reports convergence only %g after %d iterations for lat_idx = %d\n",nco_prg_nm_get(),fnc_nm,fabs(sp),itr_nbr_max,lat_idx); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:7067:10: note: 'sp' was declared here 7067 | double sp; // Current iteration latitude increment | ^~ nco_rgr.c: In function 'nco_sph_plg_area': nco_rgr.c:7851:27: warning: 'c_idx' may be used uninitialized [-Wmaybe-uninitialized] 7851 | if(c_idx) c_idx=(long *)nco_free(c_idx); | ^~~~~~~~~~~~~~~ nco_rgr.c:7311:9: note: 'c_idx' was declared here 7311 | long *c_idx; /* [idx] Point C 1-D indices for each triangle in polygon */ | ^~~~~ nco_rgr.c:7850:27: warning: 'b_idx' may be used uninitialized [-Wmaybe-uninitialized] 7850 | if(b_idx) b_idx=(long *)nco_free(b_idx); | ^~~~~~~~~~~~~~~ nco_rgr.c:7310:9: note: 'b_idx' was declared here 7310 | long *b_idx; /* [idx] Point B 1-D indices for each triangle in polygon */ | ^~~~~ nco_rgr.c:7849:27: warning: 'a_idx' may be used uninitialized [-Wmaybe-uninitialized] 7849 | if(a_idx) a_idx=(long *)nco_free(a_idx); | ^~~~~~~~~~~~~~~ nco_rgr.c:7309:9: note: 'a_idx' was declared here 7309 | long *a_idx; /* [idx] Point A 1-D indices for each triangle in polygon */ | ^~~~~ nco_rgr.c: In function 'nco_rgr_wgt': nco_rgr.c:4119:113: warning: '%s' directive argument is null [-Wformat-overflow=] 4119 | if(nco_rgr_mth_typ == nco_rgr_mth_nil) (void)fprintf(stdout,"%s: WARNING %s reports map global attribute %s = %s does not match SCRIP/ESMF conventions that support only values of \"Conservative\" and \"Bilinear\" for this attribute. Proceeding anyway...\n",nco_prg_nm_get(),fnc_nm,cnv_sng,att_val); | ^~ nco_rgr.c:6917:32: warning: 'tm_srt' may be used uninitialized [-Wmaybe-uninitialized] 6917 | tm_drn=(float)(tm_end-tm_srt)/CLOCKS_PER_SEC; | ~~~~~~~^~~~~~~~ nco_rgr.c:6540:17: note: 'tm_srt' was declared here 6540 | clock_t tm_srt; /* [us] Microseconds at start */ | ^~~~~~ nco_rgr.c:5546:9: warning: 'bnd_nm_out' may be used uninitialized [-Wmaybe-uninitialized] 5546 | if(!strcmp(bnd_nm_out,bnd_tm_nm_out)){ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_rgr.c:5476:9: note: 'bnd_nm_out' was declared here 5476 | char *bnd_nm_out; | ^~~~~~~~~~ In file included from /usr/include/stdio.h:964, from nco_rgr.h:19, from nco_rgr.c:10: In function 'fprintf', inlined from 'nco_rgr_wgt' at nco_rgr.c:4843:47: /usr/include/bits/stdio2.h:79:10: warning: 'idx_max_dvn' may be used uninitialized [-Wmaybe-uninitialized] 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function 'nco_rgr_wgt': nco_rgr.c:4823:8: note: 'idx_max_dvn' was declared here 4823 | long idx_max_dvn; /* [idx] Index of maximum deviation from 1.0 */ | ^~~~~~~~~~~ In function 'fprintf', inlined from 'nco_rgr_wgt' at nco_rgr.c:4432:11: /usr/include/bits/stdio2.h:79:10: warning: 'lat_nbr_in' may be used uninitialized [-Wmaybe-uninitialized] 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function 'nco_rgr_wgt': nco_rgr.c:4341:8: note: 'lat_nbr_in' was declared here 4341 | long lat_nbr_in; /* [idx] Number of latitudes in rectangular source grid */ | ^~~~~~~~~~ In function 'fprintf', inlined from 'nco_rgr_wgt' at nco_rgr.c:5292:13: /usr/include/bits/stdio2.h:79:10: warning: 'lon_nbr_in' may be used uninitialized [-Wmaybe-uninitialized] 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function 'nco_rgr_wgt': nco_rgr.c:4340:8: note: 'lon_nbr_in' was declared here 4340 | long lon_nbr_in; /* [idx] Number of longitudes in rectangular source grid */ | ^~~~~~~~~~ In function 'fprintf', inlined from 'nco_rgr_wgt' at nco_rgr.c:5297:8: /usr/include/bits/stdio2.h:79:10: warning: 'col_nbr_in' may be used uninitialized [-Wmaybe-uninitialized] 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ nco_rgr.c: In function 'nco_rgr_wgt': nco_rgr.c:4339:8: note: 'col_nbr_in' was declared here 4339 | long col_nbr_in; /* [idx] Number of columns in source grid */ | ^~~~~~~~~~ nco_rgr.c:4351:29: warning: 'lat_psn_src' may be used uninitialized [-Wmaybe-uninitialized] 4351 | lat_nbr_in=dmn_sz_in_int[lat_psn_src]; | ^ nco_rgr.c:4248:7: note: 'lat_psn_src' was declared here 4248 | int lat_psn_src; /* [idx] Ordinal position of latitude in rectangular source grid dimension-size array */ | ^~~~~~~~~~~ nco_rgr.c:4350:29: warning: 'lon_psn_src' may be used uninitialized [-Wmaybe-uninitialized] 4350 | lon_nbr_in=dmn_sz_in_int[lon_psn_src]; | ^ nco_rgr.c:4247:7: note: 'lon_psn_src' was declared here 4247 | int lon_psn_src; /* [idx] Ordinal position of longitude in rectangular source grid dimension-size array */ | ^~~~~~~~~~~ nco_rgr.c: In function 'nco_grd_nfr': nco_rgr.c:10744:7: warning: 'lat_typ' may be used uninitialized [-Wmaybe-uninitialized] 10744 | if(lat_typ == nco_grd_lat_nil){ | ^ nco_rgr.c:9327:23: note: 'lat_typ' was declared here 9327 | nco_grd_lat_typ_enm lat_typ; /* [enm] Latitude grid-type enum */ | ^~~~~~~ nco_rgr.c:10731:51: warning: 'lat_spn' may be used uninitialized [-Wmaybe-uninitialized] 10731 | if(flg_s2n) lat_ctr_tst_fv=lat_ntf[0L]+lat_spn/(lat_nbr-1L); else lat_ctr_tst_fv=lat_ntf[0L]-lat_spn/(lat_nbr-1L); | ~~~~~~~^~~~~~~~~~~~~ nco_rgr.c:9224:10: note: 'lat_spn' was declared here 9224 | double lat_spn; /* [dgr] Latitude span */ | ^~~~~~~ nco_rgr.c:11169:24: warning: 'msk_unn.vp' may be used uninitialized [-Wmaybe-uninitialized] 11169 | if(msk_unn.ip[idx] == mss_val_int || msk_unn.ip[idx] == 0) msk[idx]=0; | ~~~~~~~~~~^~~~~ nco_rgr.c:9333:11: note: 'msk_unn.vp' was declared here 9333 | ptr_unn msk_unn; | ^~~~~~~ nco_rgr.c: In function 'nco_ntp_vrt': nco_rgr.c:2527:72: warning: 'lev_in_min' may be used uninitialized [-Wmaybe-uninitialized] 2527 | for(size_t idx_in=0;idx_in, std::allocator > >&, fmc_cls&, ncoTree&)': fmc_gsl_cls.cc:5206:33: warning: 'var_tmp' may be used uninitialized [-Wmaybe-uninitialized] 5206 | var_tmp=nco_var_cnf_typ(NC_DOUBLE,var_tmp); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ fmc_gsl_cls.cc:5137:19: note: 'var_tmp' was declared here 5137 | var_sct *var_tmp; | ^~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -c -o ncap2_utl.o ncap2_utl.cc make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco++' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -c -o fmc_all_cls.o fmc_all_cls.cc make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco++' fmc_all_cls.cc: In member function 'bil_cls::fnd(antlr::ASTRefCount, antlr::ASTRefCount, fmc_cls&, ncoTree&)': fmc_all_cls.cc:3834:19: warning: 'var_arr' may be used uninitialized [-Wmaybe-uninitialized] 3834 | in_typ=var_arr[0]->type; | ~~~~~~~~~^ fmc_all_cls.cc:3780:12: note: 'var_arr' declared here 3780 | var_sct *var_arr[6]; | ^~~~~~~ fmc_all_cls.cc:3838:31: warning: 'var_arr' may be used uninitialized [-Wmaybe-uninitialized] 3838 | var_arr[1]=nco_var_cnf_typ(in_typ,var_arr[1]); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ fmc_all_cls.cc:3780:12: note: 'var_arr' declared here 3780 | var_sct *var_arr[6]; | ^~~~~~~ fmc_all_cls.cc:3855:19: warning: 'var_arr' may be used uninitialized [-Wmaybe-uninitialized] 3855 | if(var_arr[1]->nbr_dim < 2) | ~~~~~~~~~^ fmc_all_cls.cc:3780:12: note: 'var_arr' declared here 3780 | var_sct *var_arr[6]; | ^~~~~~~ fmc_all_cls.cc: In member function 'print_cls::fnd(antlr::ASTRefCount, antlr::ASTRefCount, fmc_cls&, ncoTree&)': fmc_all_cls.cc:5679:15: warning: 'strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 5679 | strncpy(var->val.cp,cp,sz); | ^ fmc_all_cls.cc:5675:17: note: length computed here 5675 | sz=strlen(cp); | ~~~~~~^~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf -DH5_USE_110_API -I/usr/include/udunits2 -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -c -o ncoTree.o ncoTree.cpp make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco++' In file included from /usr/include/antlr/AST.hpp:12, from /usr/include/antlr/TreeParser.hpp:12, from ncoTree.hpp:7, from ncoTree.cpp:2: In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::out_asn(antlr::ASTRefCount)' at ncoTree.cpp:4454:3: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::out_asn(antlr::ASTRefCount)' at ncoTree.cpp:4454:3: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3118:5: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3118:5: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3125:3: /usr/include/antlr/ASTRefCount.hpp:33:35: warning: pointer may be used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3118:5: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3125:3: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer may be used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3118:5: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::increment()', inlined from 'antlr::ASTRefCount::operator=(antlr::ASTRefCount const&)' at /usr/include/antlr/ASTRefCount.hpp:77:50, inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3123:9: /usr/include/antlr/ASTRefCount.hpp:28:19: warning: pointer may be used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 28 | ++count; | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3118:5: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3212:6: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3212:6: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3219:4: /usr/include/antlr/ASTRefCount.hpp:33:35: warning: pointer may be used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3212:6: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3219:4: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer may be used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3212:6: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::increment()', inlined from 'antlr::ASTRefCount::operator=(antlr::ASTRefCount const&)' at /usr/include/antlr/ASTRefCount.hpp:77:50, inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3217:10: /usr/include/antlr/ASTRefCount.hpp:28:19: warning: pointer may be used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 28 | ++count; | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3212:6: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3397:7: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3397:7: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::increment()', inlined from 'antlr::ASTRefCount::operator=(antlr::ASTRefCount const&)' at /usr/include/antlr/ASTRefCount.hpp:77:50, inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3402:11: /usr/include/antlr/ASTRefCount.hpp:28:19: warning: pointer may be used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 28 | ++count; | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3397:7: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3459:8: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3459:8: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::increment()', inlined from 'antlr::ASTRefCount::operator=(antlr::ASTRefCount const&)' at /usr/include/antlr/ASTRefCount.hpp:77:50, inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3464:12: /usr/include/antlr/ASTRefCount.hpp:28:19: warning: pointer may be used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 28 | ++count; | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign_ntl(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3459:8: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::var_lmt_one_lhs(antlr::ASTRefCount, bool)' at ncoTree.cpp:5602:2: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::var_lmt_one_lhs(antlr::ASTRefCount, bool)' at ncoTree.cpp:5602:2: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::var_lmt_one_lhs(antlr::ASTRefCount, bool)' at ncoTree.cpp:5602:2: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::var_lmt_one_lhs(antlr::ASTRefCount, bool)' at ncoTree.cpp:5602:2: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::assign(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3574:5: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3574:5: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::increment()', inlined from 'antlr::ASTRefCount::operator=(antlr::ASTRefCount const&)' at /usr/include/antlr/ASTRefCount.hpp:77:50, inlined from 'ncoTree::assign(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3579:9: /usr/include/antlr/ASTRefCount.hpp:28:19: warning: pointer may be used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 28 | ++count; | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3574:5: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::assign(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3833:6: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3833:6: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::increment()', inlined from 'antlr::ASTRefCount::operator=(antlr::ASTRefCount const&)' at /usr/include/antlr/ASTRefCount.hpp:77:50, inlined from 'ncoTree::assign(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3838:10: /usr/include/antlr/ASTRefCount.hpp:28:19: warning: pointer may be used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 28 | ++count; | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:3833:6: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::assign(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:4111:7: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:4111:7: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::assign(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:4307:8: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::assign(antlr::ASTRefCount, bool, bool)' at ncoTree.cpp:4307:8: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::where_assign(antlr::ASTRefCount, var_sct_tag*)' at ncoTree.cpp:5245:2: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::where_assign(antlr::ASTRefCount, var_sct_tag*)' at ncoTree.cpp:5245:2: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::where_assign(antlr::ASTRefCount, var_sct_tag*)' at ncoTree.cpp:5245:2: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::where_assign(antlr::ASTRefCount, var_sct_tag*)' at ncoTree.cpp:5245:2: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::var_lmt_one(antlr::ASTRefCount)' at ncoTree.cpp:5398:2: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::var_lmt_one(antlr::ASTRefCount)' at ncoTree.cpp:5398:2: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ In member function 'antlr::ASTRef::decrement()', inlined from 'antlr::ASTRefCount::~ASTRefCount()' at /usr/include/antlr/ASTRefCount.hpp:59:28, inlined from 'ncoTree::var_lmt_one(antlr::ASTRefCount)' at ncoTree.cpp:5398:2: /usr/include/antlr/ASTRefCount.hpp:33:27: warning: pointer used after 'operator delete(void*, unsigned long)' [-Wuse-after-free] 33 | return (--count==0); | ^~~~~ In member function 'antlr::ASTRefCount::~ASTRefCount()', inlined from 'ncoTree::var_lmt_one(antlr::ASTRefCount)' at ncoTree.cpp:5398:2: /usr/include/antlr/ASTRefCount.hpp:60:25: note: call to 'operator delete(void*, unsigned long)' here 60 | delete ref; | ^~~~~~~~~~ make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco++' /bin/sh ../../libtool --tag=CXX --tag=CXX --mode=link g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection ../nco/libnco.la -lantlr -lgsl -lgslcblas -lm -L/usr/lib64 -lnetcdf -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-ld -Wl,--build-id=sha1 -o ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -lgsl -lgslcblas -lm libtool: link: g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-cc1 -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/OpenCloudOS/OpenCloudOS-hardened-ld -Wl,--build-id=sha1 -o .libs/ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o ../nco/.libs/libnco.so -L/usr/lib64 -lantlr -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco++' make[3]: Nothing to be done for 'all-am'. Making all in man make[2]: Nothing to be done for 'all'. Making all in doc make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/doc' restore=: && backupdir=".am$$" && \ am__cwd=`pwd` && CDPATH="${ZSH_VERSION+.}:" && cd . && \ rm -rf $backupdir && mkdir $backupdir && \ if (/bin/sh '/builddir/build/BUILD/nco-5.1.8/autobld/missing' makeinfo --version) >/dev/null 2>&1; then \ for f in nco.info nco.info-[0-9] nco.info-[0-9][0-9] nco.i[0-9] nco.i[0-9][0-9]; do \ if test -f $f; then mv $f $backupdir; restore=mv; else :; fi; \ done; \ else :; fi && \ cd "$am__cwd"; \ if /bin/sh '/builddir/build/BUILD/nco-5.1.8/autobld/missing' makeinfo -I . \ -o nco.info nco.texi; \ then \ rc=0; \ CDPATH="${ZSH_VERSION+.}:" && cd .; \ else \ rc=$?; \ CDPATH="${ZSH_VERSION+.}:" && cd . && \ $restore $backupdir/* `echo "./nco.info" | sed 's|[^/]*$||'`; \ fi; \ rm -rf $backupdir; exit $rc make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/doc' + make -C doc html pdf make: Entering directory '/builddir/build/BUILD/nco-5.1.8/doc' rm -rf nco.htp if /bin/sh '/builddir/build/BUILD/nco-5.1.8/autobld/missing' makeinfo --html --ifinfo --no-split -I . \ -o nco.htp nco.texi; \ then \ rm -rf nco.html && mv nco.htp nco.html; \ else \ rm -rf nco.htp; exit 1; \ fi TEXINPUTS="../autobld:$TEXINPUTS" \ MAKEINFO='/bin/sh '/builddir/build/BUILD/nco-5.1.8/autobld/missing' makeinfo -I .' \ texi2dvi --pdf --batch --build-dir=nco.t2p -o nco.pdf \ nco.texi This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/builddir/build/BUILD/nco-5.1.8/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texlive/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) 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paragraph at lines 8140--8140 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8140--8140 [][] [96] [97] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8280--8280 [][] [98] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8339--8339 []@texttt # Average seasonally contiguous climatological monthly means into NH winter[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8344--8344 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8346--8346 []@texttt ncra --cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [99] Overfull \hbox (14.94176pt too wide) in paragraph at lines 8365--8365 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8368--8368 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c 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paragraph at lines 10505--10505 [][] Underfull \hbox (badness 10000) in paragraph at lines 10507--10514 []@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm- [128] [129] [130] [131] Overfull \hbox (55.18257pt too wide) in paragraph at lines 10970--10970 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h 0.0001-01.nc[] [132] [133] [134] [135] [136] [137] Overfull \hbox (78.17732pt too wide) in paragraph at lines 11381--11381 [][] [138] [139] [140] [141] [142] [143] [144] [145] Overfull \hbox (20.69044pt too wide) in paragraph at lines 12093--12093 [] @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size- 1))' \[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12100--12100 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in .nc out.nc[] [146] [147] [148] [149] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12479--12479 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12480--12480 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 12481--12481 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te mperature data[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12482--12482 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i n.nc ~/foo.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12490--12490 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [150] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12532--12532 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [151] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12607--12607 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc in.nc[] [152] [153] [154] Overfull \hbox (32.18782pt too wide) in paragraph at lines 12795--12795 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n c out.nc[] [155] [156] Overfull \hbox (112.66945pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (193.15108pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 12995--12995 [][] [157] [158] Underfull \hbox (badness 6741) in paragraph at lines 13233--13278 @texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell []@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te xttt dcEdge[]@textrm , [159] [160] [161] [162] Chapter 4 Underfull \hbox (badness 10000) in paragraph at lines 13647--13668 @texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by [163] [164] [165] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13731--13731 []@texttt [-D @textttsl dbg@texttt ] [-F] [-f] [--glb ...] [-H] [-h] [--hdf] [ --hdr_pad @textttsl nbr@texttt ] [--hpss][] [166] [167] [168] [169] [170] Overfull \hbox (20.69044pt too wide) in paragraph at lines 14139--14139 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14142--14142 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [171] [172] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14299--14299 [][] [173] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14339--14339 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi- dimensional output[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14356--14356 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24 .5,26.5,28.5[] [174] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14385--14385 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636 , 14.13716 ;[] [175] [176] [177] [178] Overfull \hbox (118.41814pt too wide) in paragraph at lines 14659--14659 [][] [179] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14764--14764 [][] [180] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14783--14783 [][] [181] [182] Overfull \hbox (83.92601pt too wide) in paragraph at lines 14953--14953 [][] [183] Overfull \hbox (95.42339pt too wide) in paragraph at lines 14979--14979 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14990--14990 [][] [184] Overfull \hbox (55.18257pt too wide) in paragraph at lines 15036--15036 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 15036--15036 [][] [185] [186] [187] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15288--15288 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc foo.nc[] [188] [189] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15430--15430 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n 3 type double[] [190] [191] Underfull \hbox (badness 10000) in paragraph at lines 15556--15565 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15575--15575 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 15617--15617 [][] [192] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15617--15617 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 15617--15617 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15617--15617 [][] [193] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15708--15708 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] [194] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15733--15733 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [195] [196] [197] Overfull \hbox (147.16158pt too wide) in paragraph at lines 15935--15935 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [198] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15952--15952 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [199] [200] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16085--16085 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16085--16085 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16085--16085 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16093--16093 [][] [201] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16161--16161 [][] [202] Overfull \hbox (244.88927pt too wide) in paragraph at lines 16232--16232 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 16232--16232 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16244--16244 [][] [203] [204] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16371--16371 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16388--16388 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16421--16421 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [205] [206] [207] [208] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16705--16706 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16713--16714 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16717--16718 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16721--16722 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16725--16726 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16741--16742 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16746--16747 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 16764--16764 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 16765--16765 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 16772--16772 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 16797--16798 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 16876--16877 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 16877--16878 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 16878--16879 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 16879--16879 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 16879--16880 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 16888--16889 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 16897--16898 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 16898--16898 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 16900--16901 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 16901--16901 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 16962--16962 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [209] [210] [211] [212] [213] [214] [215] [216] Underfull \hbox (badness 10000) in paragraph at lines 17039--17041 []@texttt status=@textbf gsl[]fit[]linear Underfull \hbox (badness 10000) in paragraph at lines 17052--17053 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17070--17071 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ [217] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17095--17095 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17122--17122 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17122--17122 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17122--17122 [][] [218] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17138--17138 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17139--17139 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17140--17140 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17147--17147 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17148--17148 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17149--17149 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [219] [220] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17255--17255 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17257--17257 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [221] [222] [223] [224] Underfull \hbox (badness 10000) in paragraph at lines 17780--17796 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [225] Underfull \hbox (badness 10000) in paragraph at lines 17840--17856 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 17926--17936 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [226] [227] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18139--18139 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18139--18139 [][] [228] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18221--18221 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18227--18227 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [229] [230] [231] [232] [233] [234] [235] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18855--18855 [][] [236] Overfull \hbox (20.69046pt too wide) in paragraph at lines 18910--18910 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss][] [237] [238] [239] [240] [241] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19337--19337 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 19341--19341 []@texttt [-n @textttsl nco_opt@texttt ] [--no_cll_msr] [--no_frm_trm] [--no_n tv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 19344--19344 []@texttt [-S @textttsl yr_prv@texttt ] [-s @textttsl yr_srt@texttt ] [--seaso ns=@textttsl csn_lst@texttt ] [--sgs_frc=@textttsl sgs_frc@texttt ] [--split][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19345--19345 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19393--19393 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [242] [243] [244] [245] [246] [247] [248] [249] [250] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20258--20258 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20259--20259 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [251] [252] [253] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20525--20525 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 20527--20527 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 20529--20529 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] [254] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20608--20608 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20653--20653 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [255] [256] Underfull \hbox (badness 10000) in paragraph at lines 20827--20827 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 20828--20828 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - [257] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20858--20858 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 20864--20864 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20865--20865 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] [258] Overfull \hbox (66.67995pt too wide) in paragraph at lines 20902--20902 [][] Overfull 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paragraph at lines 21114--21114 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21114--21114 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21114--21114 [][] [261] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21114--21114 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21114--21114 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21114--21114 [][] [262] [263] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21341--21341 [][] [264] [265] [266] [267] [268] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21652--21652 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21658--21658 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] Underfull \hbox (badness 10000) in 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[]@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23143--23143 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23144--23144 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23145--23145 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23146--23146 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23147--23147 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23148--23148 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent 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[]@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [306] [307] [308] [309] [310] Overfull \hbox (55.18257pt too wide) in paragraph at lines 24991--24991 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25004--25004 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [311] Underfull \hbox (badness 10000) in paragraph at lines 25060--25060 []@texttt [-O] [-o @textttsl output- [312] [313] [314] [315] Underfull \hbox (badness 10000) in paragraph at lines 25379--25379 []@texttt [-O] [-o @textttsl output- [316] [317] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25514--25514 []@texttt [-M] [-m @textttsl map_fl@texttt ] [--mpi_nbr=@textttsl mpi_nbr@text tt ] [--mpi_pfx=@textttsl mpi_pfx@texttt ] [--msh_fl=@textttsl msh_fl@texttt ][ ] Overfull \hbox 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[]@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 26149--26151 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [324] [325] Overfull \hbox (107.25009pt too wide) in paragraph at lines 26314--26314 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 26314--26314 [][] [326] [327] [328] [329] Overfull \hbox (55.5119pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (141.74222pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 26748--26748 [][] [330] [331] 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27613--27613 [][] [339] [340] Overfull \hbox (26.76846pt too wide) in paragraph at lines 27731--27731 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27747--27747 []@texttt ncremap --sgs_frc=sgs_landfrac_ne30.nc/landfrac -m map.nc in.nc out. nc[] [341] Overfull \hbox (21.01978pt too wide) in paragraph at lines 27869--27869 []@texttt ncremap --permute=Time,new_dim,nCells --map=map.nc in.nc out.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 27870--27870 []@texttt ncremap --permute=time,new_dim,lat,lon --map=map.nc in.nc out.nc[] [342] [343] [344] [345] [346] [347] Overfull \hbox (61.26059pt too wide) in paragraph at lines 28384--28384 []@texttt ncremap -V var_rgr -d dst.nc -O ~/rgr in.nc # CF coordinates convent ion[] Overfull \hbox (101.5014pt too wide) in paragraph at lines 28386--28386 []@texttt ncremap -R "--rgr lat_nm=xq --rgr lon_nm=zj" -d dst.nc -O ~/rgr in.n c # Manual[] [348] 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[354] Overfull \hbox (55.18257pt too wide) in paragraph at lines 28977--28977 []@texttt ncpdq -a Time,nVertLevels,maxEdges,MaxEdges2,nEdges,nCells mpas.nc m pas_ncpdq.nc[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 28978--28978 []@texttt ncremap -R "--rgr col_nm=nCells" -i mpas_ncpdq.nc -m mpas120_to_t62. nc -O ~/rgr[] [355] [356] [357] [358] [359] [360] [361] Overfull \hbox (187.40239pt too wide) in paragraph at lines 29530--29530 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 29530--29530 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 29542--29542 [][] [362] Overfull \hbox (216.14583pt too wide) in paragraph at lines 29571--29571 [][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 29590--29590 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 29590--29590 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 29590--29590 [][] [363] [364] Overfull \hbox (49.4339pt too wide) in paragraph at lines 29671--29671 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [-I][] Underfull \hbox (badness 10000) in paragraph at lines 29674--29674 []@texttt [-O] [-o @textttsl output- [365] [366] [367] [368] Chapter 5 [369] [370] [371] [372] [373] Chapter 6 [374] [375] Chapter 7 [376] (/builddir/build/BUILD/nco-5.1.8/doc/xmp/cmb_fl.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] [377] Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [][] [378] Overfull \hbox (55.18257pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 70--70 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 74--74 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 79--79 [][] ) (/builddir/build/BUILD/nco-5.1.8/doc/xmp/cmb_fl_grp.sh [379] Overfull \hbox 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paragraph at lines 27--27 [][][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32--32 [][] ) (/builddir/build/BUILD/nco-5.1.8/doc/xmp/crd.nco Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] ) (/builddir/build/BUILD/nco-5.1.8/doc/xmp/pmt_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 8--8 [][][][] [400] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [401] [402] Overfull \hbox (60.93126pt too wide) in paragraph at lines 31024--31024 [][] Chapter 9 [403] [404] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31334--31334 [][] [405] [406] [407] [408] Overfull \hbox (37.93651pt too wide) in paragraph at lines 31334--31334 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 31334--31334 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 31334--31334 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 31334--31334 [][] [409] Overfull \hbox (693.28691pt too wide) in paragraph at lines 31334--31334 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31334--31334 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31334--31334 [][] [410] Chapter 10 [411] [412] (General Index) [413] [414] [415] [416] ) (see the transcript file for additional information) Output written on nco.pdf (420 pages, 1743749 bytes). Transcript written on nco.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/builddir/build/BUILD/nco-5.1.8/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texlive/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) 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lines 8365--8365 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8368--8368 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8369--8369 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli matology[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8370--8370 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [100] [101] Overfull \hbox (43.6852pt too wide) in paragraph at lines 8537--8537 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8537--8537 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 8537--8537 [][] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9814--9814 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 9814--9814 [][] [119] [120] [121] [122] [123] [124] [125] [126] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10505--10505 [][] [127] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10505--10505 [][] Underfull \hbox (badness 10000) in paragraph at lines 10507--10514 []@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm- [128] [129] [130] [131] Overfull \hbox (55.18257pt too wide) in paragraph at lines 10970--10970 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h 0.0001-01.nc[] [132] [133] [134] [135] [136] [137] Overfull \hbox (78.17732pt too wide) in paragraph at lines 11381--11381 [][] [138] [139] [140] [141] [142] [143] [144] [145] Overfull \hbox (20.69044pt too wide) in paragraph at lines 12093--12093 [] @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size- 1))' \[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12100--12100 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in .nc out.nc[] [146] [147] [148] [149] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12479--12479 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12480--12480 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 12481--12481 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te mperature data[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12482--12482 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i n.nc ~/foo.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12490--12490 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [150] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12532--12532 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [151] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12607--12607 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc in.nc[] [152] [153] [154] Overfull \hbox (32.18782pt too wide) in paragraph at lines 12795--12795 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n c out.nc[] [155] [156] Overfull \hbox (112.66945pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (193.15108pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 12995--12995 [][] [157] [158] Underfull \hbox (badness 6741) in paragraph at lines 13233--13278 @texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell []@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te xttt dcEdge[]@textrm , [159] [160] [161] [162] Chapter 4 Underfull \hbox (badness 10000) in paragraph at lines 13647--13668 @texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by [163] [164] [165] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13731--13731 []@texttt [-D @textttsl dbg@texttt ] [-F] [-f] [--glb ...] [-H] [-h] [--hdf] [ --hdr_pad @textttsl nbr@texttt ] [--hpss][] [166] [167] [168] [169] [170] Overfull \hbox (20.69044pt too wide) in paragraph at lines 14139--14139 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14142--14142 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [171] [172] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14299--14299 [][] [173] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14339--14339 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi- dimensional output[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14356--14356 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24 .5,26.5,28.5[] [174] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14385--14385 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636 , 14.13716 ;[] [175] [176] [177] [178] Overfull \hbox (118.41814pt too wide) in paragraph at lines 14659--14659 [][] [179] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14764--14764 [][] [180] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14783--14783 [][] [181] [182] Overfull \hbox (83.92601pt too wide) in paragraph at lines 14953--14953 [][] [183] Overfull \hbox (95.42339pt too wide) in paragraph at lines 14979--14979 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14990--14990 [][] [184] Overfull \hbox (55.18257pt too wide) in paragraph at lines 15036--15036 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 15036--15036 [][] [185] [186] [187] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15288--15288 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc foo.nc[] [188] [189] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15430--15430 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n 3 type double[] [190] [191] Underfull \hbox (badness 10000) in paragraph at lines 15556--15565 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15575--15575 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 15617--15617 [][] [192] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15617--15617 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 15617--15617 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 15617--15617 [][] [193] Overfull \hbox (43.6852pt too wide) in paragraph at lines 15708--15708 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/ nco/data:"[] [194] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15733--15733 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s rt_map[] [195] [196] [197] Overfull \hbox (147.16158pt too wide) in paragraph at lines 15935--15935 []@texttt //print("sorted time (ascending order) and associated sort map =\n") ;print(time);print(srt_map);[] [198] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15952--15952 [] @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [199] [200] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16085--16085 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16085--16085 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16085--16085 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16093--16093 [][] [201] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16161--16161 [][] [202] Overfull \hbox (244.88927pt too wide) in paragraph at lines 16232--16232 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 16232--16232 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16244--16244 [][] [203] [204] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16371--16371 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16388--16388 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16421--16421 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [205] [206] [207] [208] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16705--16706 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16713--16714 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16717--16718 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16721--16722 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16725--16726 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16741--16742 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16746--16747 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 16764--16764 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 16765--16765 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 16772--16772 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 16797--16798 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 16876--16877 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 16877--16878 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 16878--16879 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 16879--16879 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 16879--16880 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 16888--16889 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 16897--16898 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 16898--16898 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 16900--16901 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 16901--16901 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 16962--16962 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [209] [210] [211] [212] [213] [214] [215] [216] Underfull \hbox (badness 10000) in paragraph at lines 17039--17041 []@texttt status=@textbf gsl[]fit[]linear Underfull \hbox (badness 10000) in paragraph at lines 17052--17053 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17070--17071 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ [217] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17095--17095 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17122--17122 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17122--17122 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17122--17122 [][] [218] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17138--17138 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17139--17139 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17140--17140 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17147--17147 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17148--17148 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17149--17149 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [219] [220] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17255--17255 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17257--17257 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [221] [222] [223] [224] Underfull \hbox (badness 10000) in paragraph at lines 17780--17796 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [225] Underfull \hbox (badness 10000) in paragraph at lines 17840--17856 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 17926--17936 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [226] [227] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18139--18139 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18139--18139 [][] [228] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18221--18221 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18227--18227 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [229] [230] [231] [232] [233] [234] [235] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18855--18855 [][] [236] Overfull \hbox (20.69046pt too wide) in paragraph at lines 18910--18910 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss][] [237] [238] [239] [240] [241] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19337--19337 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 19341--19341 []@texttt [-n @textttsl nco_opt@texttt ] [--no_cll_msr] [--no_frm_trm] [--no_n tv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 19344--19344 []@texttt [-S @textttsl yr_prv@texttt ] [-s @textttsl yr_srt@texttt ] [--seaso ns=@textttsl csn_lst@texttt ] [--sgs_frc=@textttsl sgs_frc@texttt ] [--split][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19345--19345 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19393--19393 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [242] [243] [244] [245] [246] [247] [248] [249] [250] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20258--20258 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20259--20259 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [251] [252] [253] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20525--20525 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 20527--20527 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 20529--20529 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] [254] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20608--20608 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20653--20653 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [255] [256] Underfull \hbox (badness 10000) in paragraph at lines 20827--20827 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 20828--20828 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - [257] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20858--20858 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 20864--20864 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20865--20865 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] [258] Overfull \hbox (66.67995pt too wide) in paragraph at lines 20902--20902 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 20902--20902 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 20902--20902 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 20902--20902 [][] [259] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21004--21004 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu -N ncclimo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21011--21011 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc climo[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 21013--21013 []@texttt salloc -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na me=ncclimo[] [260] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21081--21081 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21087--21087 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc limo \[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21114--21114 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21114--21114 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21114--21114 [][] [261] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21114--21114 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21114--21114 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21114--21114 [][] [262] [263] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21341--21341 [][] [264] [265] [266] [267] [268] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21652--21652 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21658--21658 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] Underfull \hbox (badness 10000) in paragraph at lines 21659--21659 []@texttt [-O] [-o @textttsl output- [269] [270] [271] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21898--21898 []@texttt nces -O ~/1.nc ~/2.nc ~/2.nc ~/out.nc # Clumsy, limited to integer w eights[] [272] [273] [274] Overfull \hbox (43.6852pt too wide) in paragraph at lines 22170--22170 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em issions.nc[] [275] Overfull \hbox (60.93126pt too wide) in paragraph at lines 22217--22217 []@texttt [-C] [-c] [--cdl] [--chk_chr] [--chk_map] [--chk_mss] [--chk_nan] [- -cmp @textttsl cmp_sng@texttt ][] [276] [277] Overfull \hbox (32.51715pt too wide) in paragraph at lines 22424--22424 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 22425--22425 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_ rec_var[] Overfull \hbox (49.76321pt too wide) in paragraph at 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[]@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23143--23143 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23144--23144 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23145--23145 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23146--23146 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23147--23147 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23148--23148 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent 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[]@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [306] [307] [308] [309] [310] Overfull \hbox (55.18257pt too wide) in paragraph at lines 24991--24991 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25004--25004 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [311] Underfull \hbox (badness 10000) in paragraph at lines 25060--25060 []@texttt [-O] [-o @textttsl output- [312] [313] [314] [315] Underfull \hbox (badness 10000) in paragraph at lines 25379--25379 []@texttt [-O] [-o @textttsl output- [316] [317] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25514--25514 []@texttt [-M] [-m @textttsl map_fl@texttt ] [--mpi_nbr=@textttsl mpi_nbr@text tt ] [--mpi_pfx=@textttsl mpi_pfx@texttt ] [--msh_fl=@textttsl msh_fl@texttt ][ ] Overfull \hbox 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[]@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 26149--26151 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [324] [325] Overfull \hbox (107.25009pt too wide) in paragraph at lines 26314--26314 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 26314--26314 [][] [326] [327] [328] [329] Overfull \hbox (55.5119pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (141.74222pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 26748--26748 [][] [330] [331] 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27613--27613 [][] [339] [340] Overfull \hbox (26.76846pt too wide) in paragraph at lines 27731--27731 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27747--27747 []@texttt ncremap --sgs_frc=sgs_landfrac_ne30.nc/landfrac -m map.nc in.nc out. nc[] [341] Overfull \hbox (21.01978pt too wide) in paragraph at lines 27869--27869 []@texttt ncremap --permute=Time,new_dim,nCells --map=map.nc in.nc out.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 27870--27870 []@texttt ncremap --permute=time,new_dim,lat,lon --map=map.nc in.nc out.nc[] [342] [343] [344] [345] [346] [347] Overfull \hbox (61.26059pt too wide) in paragraph at lines 28384--28384 []@texttt ncremap -V var_rgr -d dst.nc -O ~/rgr in.nc # CF coordinates convent ion[] Overfull \hbox (101.5014pt too wide) in paragraph at lines 28386--28386 []@texttt ncremap -R "--rgr lat_nm=xq --rgr lon_nm=zj" -d dst.nc -O ~/rgr in.n c # Manual[] [348] 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[354] Overfull \hbox (55.18257pt too wide) in paragraph at lines 28977--28977 []@texttt ncpdq -a Time,nVertLevels,maxEdges,MaxEdges2,nEdges,nCells mpas.nc m pas_ncpdq.nc[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 28978--28978 []@texttt ncremap -R "--rgr col_nm=nCells" -i mpas_ncpdq.nc -m mpas120_to_t62. nc -O ~/rgr[] [355] [356] [357] [358] [359] [360] [361] Overfull \hbox (187.40239pt too wide) in paragraph at lines 29530--29530 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 29530--29530 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 29542--29542 [][] [362] Overfull \hbox (216.14583pt too wide) in paragraph at lines 29571--29571 [][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 29590--29590 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 29590--29590 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 29590--29590 [][] [363] [364] Overfull \hbox (49.4339pt too wide) in paragraph at lines 29671--29671 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [-I][] Underfull \hbox (badness 10000) in paragraph at lines 29674--29674 []@texttt [-O] [-o @textttsl output- [365] [366] [367] [368] Chapter 5 [369] [370] [371] [372] [373] Chapter 6 [374] [375] Chapter 7 [376] (/builddir/build/BUILD/nco-5.1.8/doc/xmp/cmb_fl.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] [377] Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [][] [378] Overfull \hbox (55.18257pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 70--70 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 74--74 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 79--79 [][] ) (/builddir/build/BUILD/nco-5.1.8/doc/xmp/cmb_fl_grp.sh [379] Overfull \hbox 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paragraph at lines 27--27 [][][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32--32 [][] ) (/builddir/build/BUILD/nco-5.1.8/doc/xmp/crd.nco Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] ) (/builddir/build/BUILD/nco-5.1.8/doc/xmp/pmt_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 8--8 [][][][] [400] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [401] [402] Overfull \hbox (60.93126pt too wide) in paragraph at lines 31024--31024 [][] Chapter 9 [403] [404] Overfull \hbox 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lines 146--146 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],\smallttsl subcycle\smalltt ],[\smallttsl interleave\ smalltt ][] [416] [417] [418] [419] [420] Overfull \hbox (37.49283pt too wide) in paragraph at lines 735--735 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] [421] [422] [423] [424] [425] [426] [427] [428] [429] [430] [431] [432] [433] Overfull \hbox (9.54256pt too wide) in paragraph at lines 2098--2098 \smalltt QuantizeBitGroomRoundNumberOfSignificantDigits[] Overfull \hbox (23.71739pt too wide) in paragraph at lines 2104--2104 \smalltt QuantizeGranularBitRoundNumberOfSignificantDigits[] [434] [435] [436]) [437] [438] ) (see the transcript file for additional information) Output written on nco.pdf (446 pages, 2018172 bytes). Transcript written on nco.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (../../../.././nco.texi (/builddir/build/BUILD/nco-5.1.8/autobld/texinfo.tex Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/usr/share/texlive/texmf-dist/tex/generic/epsf/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) (./nco.aux) (/builddir/build/BUILD/nco-5.1.8/doc/my-bib-macros.texi) [1{/var/lib/texmf/font s/map/pdftex/updmap/pdftex.map}] [2] (./nco.toc [-1] [-2] [-3] [-4]) [-5] [-6] (./nco.toc) (./nco.toc) (Foreword) [1] [2] (Summary) [3] [4] Chapter 1 [5] [6] [7] [8] [9] [10] [11] [12] [13] Overfull \hbox (32.18782pt too wide) in paragraph at lines 1429--1429 []@texttt ncks fl.hdf fl.nc # Convert HDF4->netCDF4 (NCO 4.4.0+, netCDF 4.3.1+)[] [14] [15] Chapter 2 [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] Chapter 3 [27] [28] [29] [30] [31] [32] Overfull \hbox (55.18257pt too wide) in paragraph at lines 3120--3120 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3148--3148 [][] [33] [34] [35] [36] [37] [38] [39] [40] Overfull \hbox (233.39189pt too wide) in paragraph at lines 3899--3899 []@texttt http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/ncep.reanalysis. dailyavgs/surface/pres.sfc.1969.nc ~/foo.nc[] [41] Overfull \hbox (382.85777pt too wide) in paragraph at lines 3945--3945 []@texttt ncks -v Time -d Time,0,10,2 http://eosdap.hdfgroup.uiuc.edu:8080/ope ndap/data/NASAFILES/hdf5/BUV-Nimbus04_L3zm_v01-00-2012m0203t144121.h5[] Overfull \hbox (658.79478pt too wide) in paragraph at lines 3947--3947 []@texttt ncks -O -D 1 -d time,1 -d lev,0 -d lat,0,100,10 -d lon,0,100,10 -v u _velocity http://nomads.ncep.noaa.gov:9090/dods/rtofs/rtofs_global20140303/rtof s_glo_2ds_forecast_daily_prog ~/foo.nc[] [42] Overfull \hbox (95.42339pt too wide) in paragraph at lines 4020--4020 []@texttt http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/ncep.reanalysis. dailyavgs/surface \[] [43] [44] [45] [46] Overfull \hbox (37.93651pt too wide) in paragraph at lines 4424--4424 []@texttt # Convert file with groups, multiple record dimensions + netCDF4 ato mic types[] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] Overfull \hbox (20.69044pt too wide) in paragraph at lines 5317--5317 []@texttt ncks -O -G : -g cesm -3 ~/nco/data/cmip5.nc ~/cesm.nc # Extract /ces m to 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paragraph at lines 7615--7615 [][] Overfull \hbox (135.6642pt too wide) in paragraph at lines 7615--7615 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 7615--7615 [][] [90] [91] [92] [93] [94] [95] Overfull \hbox (55.18257pt too wide) in paragraph at lines 8140--8140 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8140--8140 [][] [96] [97] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8280--8280 [][] [98] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8339--8339 []@texttt # Average seasonally contiguous climatological monthly means into NH winter[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8344--8344 []@texttt ncra --cb=2014,2016,1,12,0 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8346--8346 []@texttt ncra --cb=2014,2016,1,12,0 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [99] Overfull \hbox (14.94176pt too wide) in paragraph at lines 8365--8365 []@texttt # Average seasonally discontiguous diurnally resolved means into a s eason[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8368--8368 []@texttt nces --cb=2014,2016,1,12,8 -w 92,92,91,90 MAM.nc JJA.nc SON.nc DJF.n c ANN.nc[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 8369--8369 []@texttt # Reduce twelve diurnally resolved months to make into an annual cli matology[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 8370--8370 []@texttt nces --cb=2014,2016,1,12,8 -w 31,28,31,30,31,30,31,31,30,31,30,31 cl m_??.nc ANN.nc[] [100] [101] Overfull \hbox (43.6852pt too wide) in paragraph at lines 8537--8537 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 8537--8537 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 8537--8537 [][] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] [113] [114] [115] [116] [117] [118] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9814--9814 [][] Overfull \hbox (26.43913pt too wide) in paragraph at lines 9814--9814 [][] [119] [120] [121] [122] [123] [124] [125] [126] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10505--10505 [][] [127] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10505--10505 [][] Underfull \hbox (badness 10000) in paragraph at lines 10507--10514 []@textrm These @reducedrm NSD[] @textrm al-go-rithms write an algorithm- [128] [129] [130] [131] Overfull \hbox (55.18257pt too wide) in paragraph at lines 10970--10970 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h 0.0001-01.nc[] [132] [133] [134] [135] [136] [137] Overfull \hbox (78.17732pt too wide) in paragraph at lines 11381--11381 [][] [138] [139] [140] [141] [142] [143] [144] [145] Overfull \hbox (20.69044pt too wide) in paragraph at lines 12093--12093 [] @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size- 1))' \[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12100--12100 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in .nc out.nc[] [146] [147] [148] [149] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12479--12479 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 12480--12480 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 273.9, 274[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 12481--12481 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te mperature data[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12482--12482 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i n.nc ~/foo.nc[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12490--12490 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [150] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12532--12532 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt h1.nc[] [151] Overfull \hbox (14.94176pt too wide) in paragraph at lines 12607--12607 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc in.nc[] [152] [153] [154] Overfull \hbox (32.18782pt too wide) in paragraph at lines 12795--12795 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n c out.nc[] [155] [156] Overfull \hbox (112.66945pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (193.15108pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 12995--12995 [][] Overfull \hbox (239.14058pt too wide) in paragraph at lines 12995--12995 [][] [157] [158] Underfull \hbox (badness 6741) in paragraph at lines 13233--13278 @texttt areaTriangle[]@textrm , @texttt cellMask[]@textrm , @texttt cellsOnCell []@textrm , @texttt cellsOnEdge[]@textrm , @texttt cellsOnVertex[]@textrm , @te xttt dcEdge[]@textrm , [159] [160] [161] [162] Chapter 4 Underfull \hbox (badness 10000) in paragraph at lines 13647--13668 @texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by [163] [164] [165] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13731--13731 []@texttt [-D @textttsl dbg@texttt ] [-F] [-f] [--glb ...] [-H] [-h] [--hdf] [ --hdr_pad @textttsl nbr@texttt ] [--hpss][] [166] [167] [168] [169] [170] Overfull \hbox (20.69044pt too wide) in paragraph at lines 14139--14139 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime nsion)[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14142--14142 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size is fixed[] [171] [172] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14299--14299 [][] [173] Overfull \hbox (89.6747pt too wide) in paragraph at lines 14339--14339 []@texttt (C) var_out=array(val_srt,val_inc,/$dmn1,$dmn2...,$dmnN/); // Multi- dimensional output[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14356--14356 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24 .5,26.5,28.5[] [174] Overfull \hbox (55.18257pt too wide) in paragraph at lines 14385--14385 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636 , 14.13716 ;[] [175] [176] [177] [178] Overfull \hbox (118.41814pt too wide) in paragraph at lines 14659--14659 [][] [179] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14764--14764 [][] [180] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14783--14783 [][] [181] [182] Overfull \hbox (83.92601pt too wide) in paragraph at lines 14953--14953 [][] [183] Overfull \hbox (95.42339pt too wide) in paragraph at lines 14979--14979 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14990--14990 [][] [184] Overfull \hbox (55.18257pt too wide) in paragraph at lines 15036--15036 [][] Overfull \hbox (181.6537pt too wide) in paragraph at lines 15036--15036 [][] [185] [186] [187] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15288--15288 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc foo.nc[] [188] [189] Overfull \hbox (60.93126pt too wide) in paragraph at lines 15430--15430 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n 3 type double[] [190] [191] Underfull \hbox (badness 10000) in paragraph at lines 15556--15565 []@textrm Consider ir-reg-u- Overfull \hbox (49.43388pt too wide) in paragraph at lines 15575--15575 [][] Overfull 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Add the 1-d sort map to the 3-d sort map (NCO automatically re sizes)[] [199] [200] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16085--16085 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16085--16085 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16085--16085 [][] Overfull \hbox (187.40239pt too wide) in paragraph at lines 16093--16093 [][] [201] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16161--16161 [][] [202] Overfull \hbox (244.88927pt too wide) in paragraph at lines 16232--16232 [][] Overfull \hbox (124.16682pt too wide) in paragraph at lines 16232--16232 [][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 16244--16244 [][] [203] [204] Overfull \hbox (89.6747pt too wide) in paragraph at lines 16371--16371 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 16388--16388 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min && XLONG <= lon_max);[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 16421--16421 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_ in_x,grid_in_y)[] [205] [206] [207] [208] Overfull \hbox (12.86244pt too wide) in paragraph at lines 16705--16706 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| Overfull \hbox (11.18951pt too wide) in paragraph at lines 16713--16714 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| Overfull \hbox (40.40187pt too wide) in paragraph at lines 16717--16718 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (15.75204pt too wide) in paragraph at lines 16721--16722 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| Overfull \hbox (49.22275pt too wide) in paragraph at lines 16725--16726 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| Overfull \hbox (24.5852pt too wide) in paragraph at lines 16741--16742 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| Overfull \hbox (27.32272pt too wide) in paragraph at lines 16746--16747 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| Overfull \hbox (2.30698pt too wide) in paragraph at lines 16764--16764 @textrm gsl[]sf[]coulomb[]wave[]FGp[]array| Overfull \hbox (4.42094pt too wide) in paragraph at lines 16765--16765 @textrm gsl[]sf[]coulomb[]wave[]sphF[]array| Overfull \hbox (14.64099pt too wide) in paragraph at lines 16772--16772 @textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| Overfull \hbox (6.31714pt too wide) in paragraph at lines 16797--16798 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (19.27467pt too wide) in paragraph at lines 16876--16877 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (43.86371pt too wide) in paragraph at lines 16877--16878 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (58.2204pt too wide) in paragraph at lines 16878--16879 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| Overfull \hbox (7.07959pt too wide) in paragraph at lines 16879--16879 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| Overfull \hbox (82.80943pt too wide) in paragraph at lines 16879--16880 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[] expr)| Overfull \hbox (7.29619pt too wide) in paragraph at lines 16888--16889 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| Overfull \hbox (32.54205pt too wide) in paragraph at lines 16897--16898 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| Overfull \hbox (1.07516pt too wide) in paragraph at lines 16898--16898 @textrm gsl[]sf[]legendre[]Plm[]deriv[]array| Overfull \hbox (49.02791pt too wide) in paragraph at lines 16900--16901 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| Overfull \hbox (17.56102pt too wide) in paragraph at lines 16901--16901 @textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| Overfull \hbox (3.4296pt too wide) in paragraph at lines 16962--16962 @textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| [209] [210] [211] [212] [213] [214] [215] [216] Underfull \hbox (badness 10000) in paragraph at lines 17039--17041 []@texttt status=@textbf gsl[]fit[]linear Underfull \hbox (badness 10000) in paragraph at lines 17052--17053 []@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri de_w,data_y,stride_ Underfull \hbox (badness 10000) in paragraph at lines 17070--17071 []@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_ w,data_y,stride_ [217] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17095--17095 [][] Overfull \hbox (129.91551pt too wide) in paragraph at lines 17122--17122 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 17122--17122 [][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 17122--17122 [][] [218] Overfull \hbox (141.41289pt too wide) in paragraph at lines 17138--17138 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri de, size_t n, double mean);[] Overfull \hbox (124.16682pt too wide) in paragraph at lines 17139--17139 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s ize_t stride, size_t n);[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 17140--17140 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si ze_t stride, size_t n, double f) ;[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17147--17147 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m ean);[] Overfull \hbox (95.42339pt too wide) in paragraph at lines 17148--17148 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st ride, n, var_mean);[] Overfull \hbox (83.92601pt too wide) in paragraph at lines 17149--17149 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st ride, n, var_f) ;[] [219] [220] Overfull \hbox (175.90501pt too wide) in paragraph at lines 17255--17255 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639 02, 7730127, 15531355, 10387694 ;[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17257--17257 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n c foo.nc[] [221] [222] [223] [224] Underfull \hbox (badness 10000) in paragraph at lines 17780--17796 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text rm , $@texti e[]$@textrm . Ex-am-ple: [225] Underfull \hbox (badness 10000) in paragraph at lines 17840--17856 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple: Underfull \hbox (badness 10000) in paragraph at lines 17926--17936 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple: [226] [227] Overfull \hbox (26.43913pt too wide) in paragraph at lines 18139--18139 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 18139--18139 [][] [228] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18221--18221 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14. 50, 15.00};[] Overfull \hbox (187.40239pt too wide) in paragraph at lines 18227--18227 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05 458, 37.39353, 43.29914, 49.55782 ;[] [229] [230] [231] [232] [233] [234] [235] Overfull \hbox (49.43388pt too wide) in paragraph at lines 18855--18855 [][] [236] Overfull \hbox (20.69046pt too wide) in paragraph at lines 18910--18910 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss][] [237] [238] [239] [240] [241] Overfull \hbox (20.69044pt too wide) in paragraph at lines 19337--19337 []@texttt [-d @textttsl dbg_lvl@texttt ] [--d2f] [--dpf=@textttsl dpf@texttt ] [--dpt_fl=@textttsl dpt_fl@texttt ] [-E @textttsl yr_prv@texttt ] [-e @texttts l yr_end@texttt ][] Overfull \hbox (83.92601pt too wide) in paragraph at lines 19341--19341 []@texttt [-n @textttsl nco_opt@texttt ] [--no_cll_msr] [--no_frm_trm] [--no_n tv_tms] [--no_stg_grd] [--no_stdin][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 19344--19344 []@texttt [-S @textttsl yr_prv@texttt ] [-s @textttsl yr_srt@texttt ] [--seaso ns=@textttsl csn_lst@texttt ] [--sgs_frc=@textttsl sgs_frc@texttt ] [--split][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 19345--19345 []@texttt [-t @textttsl thr_nbr@texttt ] [--tpd=@textttsl tpd@texttt ] [--uio] [-v @textttsl var_lst@texttt ] [--var_xtr=@textttsl var_xtr@texttt ] [--versio n][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 19393--19393 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o utput=drc_out[] [242] [243] [244] [245] [246] [247] [248] [249] [250] Overfull \hbox (38.26584pt too wide) in paragraph at lines 20258--20258 []@texttt ncclimo --seasons=none ... # Produce only monthly climos[ ] Overfull \hbox (49.76321pt too wide) in paragraph at lines 20259--20259 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN N[] [251] [252] [253] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20525--20525 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out[] Overfull \hbox (118.41814pt too wide) in paragraph at lines 20527--20527 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out < foo[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 20529--20529 []@texttt ncclimo --split -v T,Q,RH -s 1 -e 9 -o $drc_out $drc_in/*mdl*000[1-9 ]*.nc[] [254] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20608--20608 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20653--20653 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl - O drc_rgr[] [255] [256] Underfull \hbox (badness 10000) in paragraph at lines 20827--20827 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm - Underfull \hbox (badness 10000) in paragraph at lines 20828--20828 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm - [257] Overfull \hbox (20.69044pt too wide) in paragraph at lines 20858--20858 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma p.nc \[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 20864--20864 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg r_prv -r map.nc[] Overfull \hbox (60.93126pt too wide) in paragraph at lines 20865--20865 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg r -r map.nc \[] [258] Overfull \hbox (66.67995pt too wide) in paragraph at lines 20902--20902 [][] Overfull 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paragraph at lines 21114--21114 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 21114--21114 [][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 21114--21114 [][] [261] Overfull \hbox (49.43388pt too wide) in paragraph at lines 21114--21114 [][] Overfull \hbox (66.67995pt too wide) in paragraph at lines 21114--21114 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 21114--21114 [][] [262] [263] Overfull \hbox (55.18257pt too wide) in paragraph at lines 21341--21341 [][] [264] [265] [266] [267] [268] Overfull \hbox (26.43913pt too wide) in paragraph at lines 21652--21652 []@texttt [--cmp @textttsl cmp_sng@texttt ] [--cnk_byt @textttsl sz_byt@texttt ] [--cnk_csh @textttsl sz_byt@texttt ] [--cnk_dmn @textttsl nm@texttt ,@texttt sl sz_lmn@texttt ][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 21658--21658 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf x sfx][] Underfull \hbox (badness 10000) in 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[]@texttt ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is sometimes named...nc gen[] Overfull \hbox (112.99878pt too wide) in paragraph at lines 23143--23143 []@texttt ncgen -b -o in.hdf in.cdl # Fails: Some valid netCDF CDL brea ks HDF ncgen[] Overfull \hbox (84.25534pt too wide) in paragraph at lines 23144--23144 []@texttt hncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is hncgen in some RPM p ackages[] Overfull \hbox (95.75272pt too wide) in paragraph at lines 23145--23145 []@texttt h4_ncgen -b -o hdf.hdf hdf.cdl # HDF ncgen is h4_ncgen in Anaconda packages[] Overfull \hbox (118.74747pt too wide) in paragraph at lines 23146--23146 []@texttt ncgen-hdf -b -o hdf.hdf hdf.cdl # HDF ncgen is ncgen-hdf in some De bian packages[] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23147--23147 []@texttt hdp dumpsds hdf.hdf # ncdump/h5dump-equivalent for HDF4 [] Overfull \hbox (44.01453pt too wide) in paragraph at lines 23148--23148 []@texttt h4_ncdump dumpsds hdf.hdf # ncdump/h5dump-equivalent 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[]@textsl pck[]map[] @textrm key val-ues: `@texttt flt_dbl[]@textrm '[], `@tex ttt pck_map_flt_dbl[]@textrm '[], `@texttt sgl_dbl[]@textrm '[], [306] [307] [308] [309] [310] Overfull \hbox (55.18257pt too wide) in paragraph at lines 24991--24991 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension named "time"[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25004--25004 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim ension[] [311] Underfull \hbox (badness 10000) in paragraph at lines 25060--25060 []@texttt [-O] [-o @textttsl output- [312] [313] [314] [315] Underfull \hbox (badness 10000) in paragraph at lines 25379--25379 []@texttt [-O] [-o @textttsl output- [316] [317] Overfull \hbox (20.69044pt too wide) in paragraph at lines 25514--25514 []@texttt [-M] [-m @textttsl map_fl@texttt ] [--mpi_nbr=@textttsl mpi_nbr@text tt ] [--mpi_pfx=@textttsl mpi_pfx@texttt ] [--msh_fl=@textttsl msh_fl@texttt ][ ] Overfull \hbox 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[]@reducedrm TR[] Underfull \hbox (badness 10000) in paragraph at lines 26149--26151 []@reducedrm MOAB[] @textrm op-tions: `@texttt --method cgll --order 4 --metho d cgll [324] [325] Overfull \hbox (107.25009pt too wide) in paragraph at lines 26314--26314 [][] Overfull \hbox (95.75272pt too wide) in paragraph at lines 26314--26314 [][] [326] [327] [328] [329] Overfull \hbox (55.5119pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (141.74222pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (176.23434pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (55.5119pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (61.26059pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (112.99878pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (135.99353pt too wide) in paragraph at lines 26739--26739 [][] Overfull \hbox (204.97778pt too wide) in paragraph at lines 26748--26748 [][] [330] [331] 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27613--27613 [][] [339] [340] Overfull \hbox (26.76846pt too wide) in paragraph at lines 27731--27731 []@texttt ncremap --sgs_frc=aice --sgs_msk=tmask --sgs_nrm=100 in.nc out.nc[] Overfull \hbox (55.5119pt too wide) in paragraph at lines 27747--27747 []@texttt ncremap --sgs_frc=sgs_landfrac_ne30.nc/landfrac -m map.nc in.nc out. nc[] [341] Overfull \hbox (21.01978pt too wide) in paragraph at lines 27869--27869 []@texttt ncremap --permute=Time,new_dim,nCells --map=map.nc in.nc out.nc[] Overfull \hbox (21.01978pt too wide) in paragraph at lines 27870--27870 []@texttt ncremap --permute=time,new_dim,lat,lon --map=map.nc in.nc out.nc[] [342] [343] [344] [345] [346] [347] Overfull \hbox (61.26059pt too wide) in paragraph at lines 28384--28384 []@texttt ncremap -V var_rgr -d dst.nc -O ~/rgr in.nc # CF coordinates convent ion[] Overfull \hbox (101.5014pt too wide) in paragraph at lines 28386--28386 []@texttt ncremap -R "--rgr lat_nm=xq --rgr lon_nm=zj" -d dst.nc -O ~/rgr in.n c # Manual[] [348] 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[354] Overfull \hbox (55.18257pt too wide) in paragraph at lines 28977--28977 []@texttt ncpdq -a Time,nVertLevels,maxEdges,MaxEdges2,nEdges,nCells mpas.nc m pas_ncpdq.nc[] Overfull \hbox (49.43388pt too wide) in paragraph at lines 28978--28978 []@texttt ncremap -R "--rgr col_nm=nCells" -i mpas_ncpdq.nc -m mpas120_to_t62. nc -O ~/rgr[] [355] [356] [357] [358] [359] [360] [361] Overfull \hbox (187.40239pt too wide) in paragraph at lines 29530--29530 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 29530--29530 [][] Overfull \hbox (55.18257pt too wide) in paragraph at lines 29542--29542 [][] [362] Overfull \hbox (216.14583pt too wide) in paragraph at lines 29571--29571 [][] Overfull \hbox (118.41814pt too wide) in paragraph at lines 29590--29590 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 29590--29590 [][] Overfull \hbox (106.92076pt too wide) in paragraph at lines 29590--29590 [][] [363] [364] Overfull \hbox (49.4339pt too wide) in paragraph at lines 29671--29671 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--gl b ...] [-H] [-h] [--hdr_pad @textttsl nbr@texttt ] [--hpss] [-I][] Underfull \hbox (badness 10000) in paragraph at lines 29674--29674 []@texttt [-O] [-o @textttsl output- [365] [366] [367] [368] Chapter 5 [369] [370] [371] [372] [373] Chapter 6 [374] [375] Chapter 7 [376] (/builddir/build/BUILD/nco-5.1.8/doc/xmp/cmb_fl.sh Overfull \hbox (32.18782pt too wide) in paragraph at lines 4--4 [][] [377] Overfull \hbox (32.18782pt too wide) in paragraph at lines 25--25 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 46--46 [][] [378] Overfull \hbox (55.18257pt too wide) in paragraph at lines 56--56 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 70--70 [][] Overfull \hbox (72.42863pt too wide) in paragraph at lines 74--74 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 79--79 [][] ) (/builddir/build/BUILD/nco-5.1.8/doc/xmp/cmb_fl_grp.sh [379] Overfull \hbox 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paragraph at lines 27--27 [][][][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 28--28 [][] Overfull \hbox (32.18782pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 33--33 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 37--37 [][] ) (/builddir/build/BUILD/nco-5.1.8/doc/xmp/bi_interp.nco [397] Overfull \hbox (14.94176pt too wide) in paragraph at lines 34--34 [][][][] [398] Overfull \hbox (20.69044pt too wide) in paragraph at lines 61--61 [][][] ) (/builddir/build/BUILD/nco-5.1.8/doc/xmp/add_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 5--5 [][][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 6--6 [][][][] Overfull \hbox (49.43388pt too wide) in paragraph at lines 8--8 [][][] [399] Overfull \hbox (32.18782pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (60.93126pt too wide) in paragraph at lines 26--26 [][][][] Overfull \hbox (78.17732pt too wide) in paragraph at lines 27--27 [][][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31--31 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 32--32 [][] ) (/builddir/build/BUILD/nco-5.1.8/doc/xmp/crd.nco Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] ) (/builddir/build/BUILD/nco-5.1.8/doc/xmp/pmt_crd.sh Overfull \hbox (37.93651pt too wide) in paragraph at lines 3--3 [][] Overfull \hbox (43.6852pt too wide) in paragraph at lines 7--7 [][][][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 8--8 [][][][] [400] Overfull \hbox (14.94176pt too wide) in paragraph at lines 17--17 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 20--20 [][] Overfull \hbox (37.93651pt too wide) in paragraph at lines 22--22 [][] Overfull \hbox (89.6747pt too wide) in paragraph at lines 31--31 [][] ) Chapter 8 [401] [402] Overfull \hbox (60.93126pt too wide) in paragraph at lines 31024--31024 [][] Chapter 9 [403] [404] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31334--31334 [][] [405] [406] [407] [408] Overfull \hbox (37.93651pt too wide) in paragraph at lines 31334--31334 [][] Overfull \hbox (20.69044pt too wide) in paragraph at lines 31334--31334 [][] Overfull \hbox (95.42339pt too wide) in paragraph at lines 31334--31334 [][] Overfull \hbox (469.08809pt too wide) in paragraph at lines 31334--31334 [][] [409] Overfull \hbox (693.28691pt too wide) in paragraph at lines 31334--31334 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31334--31334 [][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 31334--31334 [][] [410] Chapter 10 [411] [412] (General Index) [413] [414] (./nco.cps [415] Overfull \hbox (37.49283pt too wide) in paragraph at lines 137--137 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] Overfull \hbox (32.76788pt too wide) in paragraph at lines 146--146 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],\smallttsl subcycle\smalltt ],[\smallttsl interleave\ smalltt ][] [416] [417] [418] [419] [420] Overfull \hbox (37.49283pt too wide) in paragraph at lines 735--735 \smallttsl dim\smalltt ,[\smallttsl min\smalltt ],[\smallttsl max\smalltt ],[\s mallttsl stride\smalltt ],[\smallttsl subcycle\smalltt ],[\smallttsl interleave \smalltt ][] [421] [422] [423] [424] [425] [426] [427] [428] [429] [430] [431] [432] [433] Overfull \hbox (9.54256pt too wide) in paragraph at lines 2098--2098 \smalltt QuantizeBitGroomRoundNumberOfSignificantDigits[] Overfull \hbox (23.71739pt too wide) in paragraph at lines 2104--2104 \smalltt QuantizeGranularBitRoundNumberOfSignificantDigits[] [434] [435] [436]) [437] [438] ) (see the transcript file for additional information) Output written on nco.pdf (446 pages, 2018353 bytes). Transcript written on nco.log. make: Leaving directory '/builddir/build/BUILD/nco-5.1.8/doc' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.XATd2V + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64 ++ dirname /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64 + cd nco-5.1.8 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64 'INSTALL=/usr/bin/install -p' Making install in data make[1]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/data' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin' /usr/bin/install -p ncclimo ncremap ncz2psx '/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin' make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/data' Making install in src make[1]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src' Making install in nco make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/lib64' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p libnco.la '/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/lib64' libtool: install: /usr/bin/install -p .libs/libnco-5.1.8.so /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/lib64/libnco-5.1.8.so libtool: install: (cd /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/lib64 && { ln -s -f libnco-5.1.8.so libnco.so || { rm -f libnco.so && ln -s libnco-5.1.8.so libnco.so; }; }) libtool: install: /usr/bin/install -p .libs/libnco.lai /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/lib64/libnco.la libtool: install: /usr/bin/install -p .libs/libnco.a /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/lib64/libnco.a libtool: install: chmod 644 /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/lib64/libnco.a libtool: install: ranlib /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/lib64/libnco.a libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p ncatted ncbo ncecat ncflint ncks ncpdq ncra ncrename ncwa '/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin' libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncatted /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncatted libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncbo /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncbo libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncecat /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncecat libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncflint /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncflint libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncks /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncks libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncpdq /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncpdq libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncra /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncra libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncrename /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncrename libtool: warning: 'libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncwa /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncwa /usr/bin/make install-exec-hook make[4]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco' cd /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin && ln -s -f ncbo ncdiff || (rm -f ncdiff && ln -s -f ncbo ncdiff) cd /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin && ln -s -f ncra ncea || (rm -f ncea && ln -s -f ncra ncea) cd /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin && ln -s -f ncra nces || (rm -f nces && ln -s -f ncra nces) cd /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin && ln -s -f ncra ncrcat || (rm -f ncrcat && ln -s -f ncra ncrcat) make[4]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco' Making install in nco++ make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco++' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src/nco++' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin' /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -p ncap2 '/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin' libtool: warning: '../nco/libnco.la' has not been installed in '/usr/lib64' libtool: install: /usr/bin/install -p .libs/ncap2 /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncap2 make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco++' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src/nco++' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src' make[3]: Entering directory '/builddir/build/BUILD/nco-5.1.8/src' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/src' Making install in man make[1]: Entering directory '/builddir/build/BUILD/nco-5.1.8/man' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/man' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/man/man1' /usr/bin/install -p -m 644 ncap2.1 ncatted.1 ncbo.1 ncclimo.1 nces.1 ncecat.1 ncflint.1 ncks.1 nco.1 ncpdq.1 ncra.1 ncrcat.1 ncremap.1 ncrename.1 ncwa.1 ncz2psx.1 '/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/man/man1' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/man' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/man' Making install in doc make[1]: Entering directory '/builddir/build/BUILD/nco-5.1.8/doc' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8/doc' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/info' /usr/bin/install -p -m 644 ./nco.info ./nco.info-1 ./nco.info-2 ./nco.info-3 ./nco.info-4 '/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/info' install-info --info-dir='/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/info' '/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/info/nco.info' make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/doc' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.1.8/doc' make[1]: Entering directory '/builddir/build/BUILD/nco-5.1.8' make[2]: Entering directory '/builddir/build/BUILD/nco-5.1.8' make[2]: Nothing to be done for 'install-exec-am'. make[2]: Nothing to be done for 'install-data-am'. make[2]: Leaving directory '/builddir/build/BUILD/nco-5.1.8' make[1]: Leaving directory '/builddir/build/BUILD/nco-5.1.8' + rm /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/lib64/libnco.la + rm -f /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/info/dir + chrpath -d -k /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncap2 /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncatted /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncbo /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncclimo /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncdiff /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncea /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncecat /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/nces /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncflint /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncks /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncpdq /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncra /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncrcat /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncremap /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncrename /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncwa /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncz2psx `/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncclimo' probably isn't an ELF file. elf_open: Exec format error `/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncremap' probably isn't an ELF file. elf_open: Exec format error `/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncz2psx' probably isn't an ELF file. elf_open: Exec format error + : + /usr/bin/find-debuginfo -j8 --strict-build-id -m -i --build-id-seed 5.1.8-1.oc9 --unique-debug-suffix -5.1.8-1.oc9.aarch64 --unique-debug-src-base nco-5.1.8-1.oc9.aarch64 -S debugsourcefiles.list /builddir/build/BUILD/nco-5.1.8 extracting debug info from /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncap2 extracting debug info from /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncpdq extracting debug info from /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncra extracting debug info from /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncatted extracting debug info from /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncbo extracting debug info from /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncflint extracting debug info from /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncks extracting debug info from /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncecat extracting debug info from /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncrename extracting debug info from /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/bin/ncwa extracting debug info from /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/lib64/libnco-5.1.8.so cpio: src/nco/ncap_yacc.h: Cannot stat: No such file or directory cpio: src/nco/ncap_yacc.y: Cannot stat: No such file or directory 12470 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/OpenCloudOS/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/OpenCloudOS/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/OpenCloudOS/brp-mangle-shebangs mangling shebang in /usr/bin/ncremap from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncclimo from /usr/bin/env bash to #!/usr/bin/bash mangling shebang in /usr/bin/ncz2psx from /usr/bin/env bash to #!/usr/bin/bash + /usr/lib/rpm/OpenCloudOS/brp-python-bytecompile '' 1 0 + /usr/lib/rpm/OpenCloudOS/brp-python-hardlink Processing files: nco-5.1.8-1.oc9.aarch64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.G9Rq62 + umask 022 + cd /builddir/build/BUILD + cd nco-5.1.8 + DOCDIR=/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/doc/nco + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/doc/nco + cp -pr README README.md /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/doc/nco + cp -pr doc/rtfm.txt /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/doc/nco + cp -pr doc/nco.html /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/doc/nco + cp -pr doc/nco.pdf /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/doc/nco + cp -pr doc/nco.css /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/doc/nco + cp -pr doc/index.shtml /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/doc/nco + cp -pr doc/TODO /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/doc/nco + cp -pr doc/ChangeLog /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/doc/nco + cp -pr doc/nco.png /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/doc/nco + cp -pr doc/nco_news.shtml /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/doc/nco + cp -pr doc/nsf.png /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/doc/nco + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.dbj89H + umask 022 + cd /builddir/build/BUILD + cd nco-5.1.8 + LICENSEDIR=/builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/licenses/nco + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/licenses/nco + cp -pr doc/LICENSE /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64/usr/share/licenses/nco + RPM_EC=0 ++ jobs -p + exit 0 Provides: libnco-5.1.8.so()(64bit) nco = 5.1.8-1.oc9 nco(aarch-64) = 5.1.8-1.oc9 Requires(interp): /sbin/ldconfig /sbin/ldconfig Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires(post): /sbin/ldconfig Requires(postun): /sbin/ldconfig Requires: /usr/bin/bash ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libcurl.so.4()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgsl.so.27()(64bit) libgslcblas.so.0()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.35)(64bit) libm.so.6(GLIBC_2.38)(64bit) libnco-5.1.8.so()(64bit) libnetcdf.so.19()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libudunits2.so.0()(64bit) rtld(GNU_HASH) Processing files: nco-devel-5.1.8-1.oc9.aarch64 Provides: nco-devel = 5.1.8-1.oc9 nco-devel(aarch-64) = 5.1.8-1.oc9 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: nco-static-5.1.8-1.oc9.aarch64 Provides: nco-static = 5.1.8-1.oc9 nco-static(aarch-64) = 5.1.8-1.oc9 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: nco-debugsource-5.1.8-1.oc9.aarch64 Provides: nco-debugsource = 5.1.8-1.oc9 nco-debugsource(aarch-64) = 5.1.8-1.oc9 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: nco-debuginfo-5.1.8-1.oc9.aarch64 Provides: debuginfo(build-id) = 0b61e6f70579fd7d080511432fa1986bbbd0c44e debuginfo(build-id) = 23a6da29e451a0624aec6a82c87258535eccc6f3 debuginfo(build-id) = 25502f172d5da3550057e087709ad9aae0519494 debuginfo(build-id) = 41ca9906a551228a50d8037763a747a1ecd552ea debuginfo(build-id) = 7fb6e3a1ec8c05b48878f6349854b0bc5ff04980 debuginfo(build-id) = 9c3402d5b36747f51a6cdc82aef85db1cfc2eb75 debuginfo(build-id) = ace195b079bded5eb0a5f12b53c5b409a71f3b6e debuginfo(build-id) = bbf71ec5ee7bafa28641762014f3f409cb50ee2d debuginfo(build-id) = d236d2ea3e14340c986a6aad2988af01ea2c19e9 debuginfo(build-id) = efa87da4265aecbd85547cd7fa2a2d956124fd75 debuginfo(build-id) = f51dfee46090295d20134bc78777061bc61bd412 libnco-5.1.8.so-5.1.8-1.oc9.aarch64.debug()(64bit) nco-debuginfo = 5.1.8-1.oc9 nco-debuginfo(aarch-64) = 5.1.8-1.oc9 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: nco-debugsource(aarch-64) = 5.1.8-1.oc9 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/nco-5.1.8-1.oc9.aarch64 Wrote: /builddir/build/RPMS/nco-devel-5.1.8-1.oc9.aarch64.rpm Wrote: /builddir/build/RPMS/nco-static-5.1.8-1.oc9.aarch64.rpm Wrote: /builddir/build/RPMS/nco-debugsource-5.1.8-1.oc9.aarch64.rpm Wrote: /builddir/build/RPMS/nco-5.1.8-1.oc9.aarch64.rpm Wrote: /builddir/build/RPMS/nco-debuginfo-5.1.8-1.oc9.aarch64.rpm Child return code was: 0